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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL1014
- pan locus tag?: SAUPAN003181000
- symbol: SACOL1014
- pan gene symbol?: cpaA
- synonym:
- product:
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: pseudogene
- locus tag: SACOL1014
- symbol: SACOL1014
- product:
- replicon: chromosome
- strand: +
- coordinates: 1021519..1023363
- length: 1845
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3236149 NCBI
- RefSeq:
- BioCyc:
- MicrobesOnline: 912483 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1801ATGGAGTTTTTATCTTTAGTTATTGTTGTTTTAGCAGCGTTTTTAACTCCAATAATTGTC
AATCGATTAAATATTAATTTCTTGCCAGTTGTTGTTGCAGAAATTTTGATGGGGATTGTG
ATTGGAAATTCATTTCTAAATATAGTAGAAAGGGATTCAATTCTAAATATTTTATCAACG
TTAGGCTTTATCTTTTTAATGTTTTTAAGTGGTTTAGAAATTGATTTTAAAGCTTTTAAA
AAAGATAAACGCGCACGTCAAGGACAAAATGATGATGAATCCTCAATTCCAGGGCATCTT
AATCTAGCGTTAACTGTATTTGCATTTATTATGATTATTTCGATTCTTTTAGCGTATGTA
TTTAAATGGCTTGGATTAGTGGATGATGTGTTATTAATGGTCATTATCATTTCAACTATT
TCCTTAGGCGTAGTTGTTCCAACTTTAAAAGAAATGAATATTATGAGAACAACTATAGGG
CAATTTATCCTATTAGTAGCAGTACTTGCGGACTTAGTAACTATGATTTTATTAACGGTC
TATGGCGCAATCAATGGTCAAGGCGGCAGTACAATATGGTTAATAGGTATATTAGTTGTT
TTCACAGCAATTTCATATATTTTAGGTGTTCAATTTAAAAGAATGTCATTTTTACAAAAA
TTGATGGATGGTACGACGCAAATCGGTATTCGTGCGGTATTTGCATTAATAATATTATTA
GTAGCCCTAGCAGAGGGAGTTGGCGCAGAAAATATATTAGGTGCATTCTTAGCAGGTGTC
GTTGTTTCATTATTAAATCCAGATGAAGAAATGGTTGAAAAGTTAGACTCATTTGGTTAT
GGGTTCTTTATTCCTATTTTCTTTATAATGGTTGGTGTAGATTTAAACATACCTTCATTA
ATTAAAGAACCGAAATTACTAATTATCATACCGATTTTAATCGTTGCATTTATCATTTCA
AAATTAATTCCAGTCATGTTTATTCGACGTTGGTTTGATATGAAAACAACGATTGCATCA
GCATTTTTATTAACATCAACATTATCGCTCGTGATAGCTGCAGCCAAAATTTCAGAAAGA
TTAAATGCTATTTCAGCTGAAACGTCAGGTATATTAATTTTAAGCGCAGTCATTACATGT
GTATTCGTTCCGATTATTTTCAAAAAACTGTTTCCAGTTCCAGATGAGTTTAACCGTAAA
ATTGAAGTTAGTTTAATTGGTAAAAATCAATTAACGATTCCTATAGCGCAAAATTTAACA
TCTCAGTTATATGACGTGACATTATATTATCGCAAAGACTTGAGTGATCGTCGTCAATTG
TCAGATGATATCACGATGATATAAATTGCTGATTATGAACAAGATGTTTTAGAACGACTA
GGTCTGTTTGACCGAGACATAGTTGTTTGTGCTACGAATGACGATGATATTAACCGAAAA
GTTGCTAAATTAGCCAAAGCACATCAAGTTGAGCGTGTCATTTGCAGACTTGAAAGCACA
ACGGACGATACAGAGTTAGTTGATTCAGGTATTGAAATTTTCAGTAGCTACTTAAGTAAT
AAAATCTTATTAAAAGGTTTAATTGAAACACCTAACATGTTGAATTTATTAAGTAATGTT
GAAACGTCACTATATGAAATTCAAATGTTAAATTATAAATATGAAAATATTCAATTACGT
AATTTCCCATTCGGAGGAGACATCATCTTCGTGCGTATTATCCGTAATAATGAGTCGATT
GTTCCGCATGGAGATACACAATTGCGATATGGAGATCGCTTAATTGTTACCGGTGCTAAA
GAATACGTTGATGAATTGAAGCAAGAGTTAGAATTTTATTTTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL1014
- symbol: SACOL1014
- description:
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for N315, NCTC8325, USA300_FPR3757
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- LocateP:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Rebecca M Corrigan, Ivan Campeotto, Tharshika Jeganathan, Kevin G Roelofs, Vincent T Lee, Angelika Gründling
Systematic identification of conserved bacterial c-di-AMP receptor proteins.
Proc Natl Acad Sci U S A: 2013, 110(22);9084-9
[PubMed:23671116] [WorldCat.org] [DOI] (I p)