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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL0759
- pan locus tag?: SAUPAN002584000
- symbol: SACOL0759
- pan gene symbol?: fruA
- synonym:
- product:
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: pseudogene
- locus tag: SACOL0759
- symbol: SACOL0759
- product:
- replicon: chromosome
- strand: +
- coordinates: 780467..782424
- length: 1958
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3237829 NCBI
- RefSeq:
- BioCyc:
- MicrobesOnline: 912234 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1921ATGAGAGTAACAGAGTTATTAACAAAAGATACAATAGCAATGGATTTAATGGCAAATGAC
AAAAATGGTGTTATTGATGAGTTAGTAAATCAATTAGACAAAGCAGGTAAATTAAGTGAT
GTCGCGTCATTTAAGGAAGCGATTCACAATCGAGAATCACAAAGTACAACTGGTATCGGC
GAAGGTATTGCCATTCCACATGCCAAAGTGGCCGCAGTTAAGTCACCAGCTATTGCGTTT
GGTAAATCTAAAGCAGGCGTAGATTATCAAAGTTTGGATATGCAACCAGCACACTTATTC
TTTATGATTGCAGCGCCAGAAGGTGGCGCCCAAACACATCTAGATGCTTTAGCTAAGTTG
TCTGGTATTTTAATGGATGAAAATGTACGTGAGAAATTATTACATGCTTCATCACCTGAA
GAAGTACTAGCGATCATAGATGAGGCTGATGATGAAGTGACAAAAGAAGAAGAGGCAGAA
GCTGAAGCACAACAAGTTGCAACTGCAGAACAATCATCTAAACAATCTAATGAGCCATAT
GTGTTAGCAGTAACTGCTTGTCCAACAGGTATTGCACACACATATATGGCACGTGATGCA
TTGAAAAAGCAAGCGGATAAAATGGGTATTAAAATTAAAGTAGAAACGAATGGTTCAAGC
GGCATTAAAAACCATTTAACTGAACAAGATATTGAAAATGCAACAGGTATCATTGTTGCT
GCTGATGTTCATGTTGAGACGGATCGCTTCGATGGTAAAAATGTCGTAGAAGTACCAGTA
GCAGATGGTATTAAACGCCCAGAAGAATTAATTAATAAAGCATTAGATACAAGTCGTAAA
CCTTTTGTTGCCCGTGATGGTCAAAGAAAAGGTAACTCAAATGACAGTCAAGAAAAATTA
AGCCCAGGTAAAGCATTCTATAAACACTTAATGAACGGTGTTTCTAACATGTTGCCACTT
GTAATATCTGGTGGTATTTTAATGGCAATTGTATTTTTATTTGGAGCAAATTCATTTAAT
CCAAAAAGCTCAGAGTACAATGCGTTTGCAGAGCAGCTTTGGAACATTGGTAGTAAAAGT
GCATTCGCGTTAATCATTCCAATTTTATCTGGATTCATTGCACGTAGTATTGCGGATAAA
CCTGGTTTCGCTTCAGGTCTTGTAGGTGGTATGTTAGCAATTTCAGGTGGTTCAGGATTT
ATTGGTGGTATTATTGCAGGTTTCTTAGCAGGTTACTTAACACAAGGTGTTAAAGCCATG
ACACGTAAGTTACCACAAGCATTAGAGGGATTAAAGCCAACATTAATTTATCCACTATTA
ACAGTGACGGCTACAGGCTTATTGATGATTTATGCCTTTAATCCACCAGCATCTTGGTTA
AATCATTTGTTATTAGATGGATTAAACAATTTATCAGGTTCTAATATTGTATTATTAGGT
TTAGTTATTGGCGCTATGATGGCGATTGATATGGGCGGTCCATTCAACAAAGCGGCATAT
GTTTTGCAACAGGTGCGTTGATTGAAGGTAATGCAGCACCAATTACAGCTGCAATGATTG
GTGGTATGATTCCACCGTTAGCAATTGCGACAGCGATGTTAATTTTTAGACGTAAATTTA
CAAAAGAACAACGTGGTTCAATTATCCCTAACTATGTGATGGGTATGTCATTTATTACAG
AAGGTGCGATTCCATTTGCAGCTGCCGATCCATTACGTGTTATTCCTTCAATGATGATTG
GTTCAGGTATAGGTGGCGCAATTGCTTTAGGCTTAGGTTCACGAATTACTGCGCCACATG
GTGGTATTATTGTAATTGTTGGTACTGATGGTGCACACTTACTTCAAACTCTTATTGCAC
TTCTAGTTGGCACATTAGTTTCAGCATTAATTTACGGTTTAATCAAACCAAAGTTAACTG
AAACAGAAATCGAAGCTTCAAAATCAATGGACGAGTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL0759
- symbol: SACOL0759
- description:
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for N315, NCTC8325, USA300_FPR3757
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- LocateP:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulators: FruR* (repression) regulon, CcpA regulon
FruR* (TF) important in Fructose utilization; RegPrecise transcription unit transferred from N315 data RegPrecise CcpA (TF) important in Carbon catabolism; RegPrecise transcription unit transferred from N315 data RegPrecise
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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