From AureoWiki
Jump to navigation Jump to search

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS07385 [old locus tag: NWMN_1312 ]
  • pan locus tag?: SAUPAN003815000
  • symbol: NWMN_RS07385
  • pan gene symbol?: msa
  • synonym:
  • product: protein msa

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_RS07385 [old locus tag: NWMN_1312 ]
  • symbol: NWMN_RS07385
  • product: protein msa
  • replicon: chromosome
  • strand: -
  • coordinates: 1445274..1445675
  • length: 402
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_009641 (1445274..1445675) NCBI
  • BioCyc:
  • MicrobesOnline: see NWMN_1312

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    ATGAAATATCTTATCCTTAGTTTAGTTGCTAATTTATTAGTTTTCGGTGTATTATCTGCA
    ATTGGATTAAATATTAATATTTTAGCAGCAATGATGATTGTATTAGTGATTCCGATAATG
    ATTTCTGGGATACTATTTTTCAAAACTAATATTGATAAAACATACATATTTTTTAACATC
    ATATTTATCGACTTTTATTACTATATTTACAATGTACATTTAATGACTTTGCCAAAGTTT
    AATAATTATATTAAAGCAGAGATGATGGAATTAGAAGATATTGATGTATTAATTACAAGT
    AAAGATTTTGGATTTGATGAAATTCTGTTTTATACATTATATTTGTTGTTAATTCTTATC
    GTTTTATATTATTTGAAAAAGCAAGTAAAGCATAAAATCTAA
    60
    120
    180
    240
    300
    360
    402

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_RS07385 [old locus tag: NWMN_1312 ]
  • symbol: NWMN_RS07385
  • description: protein msa
  • length: 133
  • theoretical pI: 7.62953
  • theoretical MW: 15657
  • GRAVY: 1.02105

⊟Function[edit | edit source]

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.011365
    • TAT(Tat/SPI): 0.000747
    • LIPO(Sec/SPII): 0.098377
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNIIFIDFYYYIYNVHLMTLPKFNNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILIVLYYLKKQVKHKI

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://fungenwikiserver.biologie.uni-greifswald.de/aureowiki/index.php?title=NWMN_RS07385&oldid=80996"