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NCBI: 06-JUL-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_2014 [new locus tag: NWMN_RS11645 ]
  • pan locus tag?: SAUPAN005401000
  • symbol: NWMN_2014
  • pan gene symbol?: atpI
  • synonym:
  • product: hypothetical protein

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: NWMN_2014 [new locus tag: NWMN_RS11645 ]
  • symbol: NWMN_2014
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 2231645..2231998
  • length: 354
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    ATGAGTCGTTTCTACAACATTTTTAAACAGTTCATTCAATATTATTTTTATCTAATAATA
    ATATTGGGAGGATTATACCTTTATACACACCATGCATTTATCTTAGGATTAATCATTGGT
    GTTACTGGTTCTGCAATCAACACATGTATTTTTGAATGCTATTTAGCTAAAGCTAAAAGA
    CCAGACACTATGCATATTTCAACTGGAAATATGTGGCGATACTTAGTTGCAATTATTGCC
    TGTATGATTTGGTACCTTAATAAAGCGCATGTAAGTATCATCGGTATAATTATTGGTTTA
    ATGATTTCATATGTTGTAGTTATCATACGTCCTTTACTAAAGGTGAGCAAATAA
    60
    120
    180
    240
    300
    354


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: NWMN_2014 [new locus tag: NWMN_RS11645 ]
  • symbol: NWMN_2014
  • description: hypothetical protein
  • length: 117
  • theoretical pI: 9.84561
  • theoretical MW: 13487.3
  • GRAVY: 0.92906

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED  :
    • ATP synthase protein I
    Respiration ATP synthases F0F1-type ATP synthase  ATP synthase protein I
  • PFAM:
    ATPase_I_AtpR (CL0478) ATP-synt_I; ATP synthase I chain (PF03899; HMM-score: 32.1)
    and 4 more
    no clan defined MNHE; Na+/H+ ion antiporter subunit (PF01899; HMM-score: 14.1)
    GNVR; G-rich domain on putative tyrosine kinase (PF13807; HMM-score: 9.9)
    Phage_holin_6_1; Bacteriophage holin of superfamily 6 (Holin_LLH) (PF09682; HMM-score: 9.4)
    RseC_MucC; Positive regulator of sigma(E), RseC/MucC (PF04246; HMM-score: 6.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9994
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0005
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: -1
    • N-terminally Anchored Score: 1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.052139
    • TAT(Tat/SPI): 0.001468
    • LIPO(Sec/SPII): 0.006078
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSRFYNIFKQFIQYYFYLIIILGGLYLYTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTGNMWRYLVAIIACMIWYLNKAHVSIIGIIIGLMISYVVVIIRPLLKVSK

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]


⊟Relevant publications[edit | edit source]

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