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NCBI: 06-JUL-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_0761 [new locus tag: NWMN_RS04305 ]
- pan locus tag?: SAUPAN002802000
- symbol: cspC
- pan gene symbol?: cspC
- synonym:
- product: cold-shock protein CSD family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_0761 [new locus tag: NWMN_RS04305 ]
- symbol: cspC
- product: cold-shock protein CSD family protein
- replicon: chromosome
- strand: +
- coordinates: 857867..858067
- length: 201
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 5330441 NCBI
- RefSeq: YP_001331795 NCBI
- BioCyc:
- MicrobesOnline: 3706310 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGAATAACGGTACAGTTAAATGGTTTAATGCAGAAAAAGGTTTTGGTTTCATCGAAAGA
GAAGATGGTAGCGACGTATTCGTACACTTCTCAGCAATCGCTGAAGATGGATACAAATCA
TTAGAAGAAGGCCAAAAAGTTGAATTCGACATCGTTGAAGGCGACCGTGGCGAGCAAGCT
GCAAACGTAGTTAAAATGTAA60
120
180
201
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_0761 [new locus tag: NWMN_RS04305 ]
- symbol: CspC
- description: cold-shock protein CSD family protein
- length: 66
- theoretical pI: 4.18132
- theoretical MW: 7374.06
- GRAVY: -0.513636
⊟Function[edit | edit source]
- ⊞TIGRFAM: Cellular processes Adaptations to atypical conditions cold shock domain protein CspD (TIGR02381; HMM-score: 91.9)DNA metabolism DNA replication, recombination, and repair cold shock domain protein CspD (TIGR02381; HMM-score: 91.9)and 1 more
- TheSEED :
- Cold shock protein of CSP family
- ⊞PFAM: OB (CL0021) CSD; 'Cold-shock' DNA-binding domain (PF00313; HMM-score: 110)and 4 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNNGTVKWFNAEKGFGFIEREDGSDVFVHFSAIAEDGYKSLEEGQKVEFDIVEGDRGEQAANVVKM
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available