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FunGene: 08-OCT-2024

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: JSNZ_002065
  • pan locus tag?: SAUPAN005395000
  • symbol: atpG
  • pan gene symbol?: atpG
  • synonym:
  • product: ATP synthase F1 subunit gamma

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: JSNZ_002065
  • symbol: atpG
  • product: ATP synthase F1 subunit gamma
  • replicon: chromosome
  • strand: -
  • coordinates: 2078532..2079398
  • length: 867
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq:
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    GTGGCTTCTCTTAAAGAAATAGATACTCGAATAAAATCAACCAAAAAAATGAAGCAGATT
    ACGAAAGCGATGAACATGGTATCAAGTTCAAAACTTCGTAGAGCTGAAAAAAATACAAAA
    CAATTCACACCATATATGGATAAAATGCAAGATGCAATTACTGCAGTTGCAGGGGCAAGT
    AGCAATACAAACCATCCAATGCTAAGACCTCGTAAAATTACTAGAAGTGGATATTTAGTT
    ATCACGAGTGATAAAGGTTTAGCAGGTGCATATAGTGCAAACGTGCTTAAAAAATTGATT
    ACTGATATTGAAGCGAAACATCAAGATAGTAGCGAATACAGTATTGTAGTTTTAGGGCAA
    CAAGGTGTTGATTTCCTAAAAAATAGAGGTTATGACATTGAGTATTCTCAAGTAGACGTA
    CCTGATCAACCTTCTTTCAAATCTGTTCAAGCACTAGCTAACCATGCTATAGACTTATAC
    AGTGAAGAAGAAATTGATGAATTAAATATATACTATAGTCATTATGTCAGCGTTCTTGAA
    AACAAGCCTACATCTAGACAAGTATTACCATTATCTCAAGAGGATTCTAGTAAGGGGCAT
    GGTCATTTGTCTTCTTATGAATTTGAGCCAGATAAAGAATCTATCTTAAGTGTAATCTTG
    CCTCAATATGTTGAGAGTTTGATTTACGGAACAATATTAGACGCAAAAGCAAGTGAGCAT
    GCAACACGTATGACTGCGATGAAAAATGCCACTGATAATGCAACTGAACTTATTGATGAC
    TTATCATTAGAATATAACAGAGCGAGACAAGCAGAAATTACGCAACAAATTACTGAAATT
    GTTGGTGGTTCCGCAGCGCTTGAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    867

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: JSNZ_002065
  • symbol: AtpG
  • description: ATP synthase F1 subunit gamma
  • length: 288
  • theoretical pI: 5.92712
  • theoretical MW: 32106
  • GRAVY: -0.482986

⊟Function[edit | edit source]

  • reaction:
    EC 7.1.2.2?  ExPASy
    non-specified enzyme name
  • TIGRFAM:
    Metabolism Energy metabolism ATP-proton motive force interconversion ATP synthase F1, gamma subunit (TIGR01146; EC 3.6.3.14; HMM-score: 325.9)
    and 1 more
    alternate F1F0 ATPase, F1 subunit gamma (TIGR03323; EC 3.6.3.-; HMM-score: 83.5)
  • TheSEED: data available for COL, N315, NCTC8325, Newman, USA300_FPR3757
  • PFAM:
    no clan defined ATP-synt; ATP synthase (PF00231; HMM-score: 333.8)
    and 2 more
    DUF7365; Coiled-coil region of unknown function (DUF7365) (PF24073; HMM-score: 12.7)
    T3SSipB; Type III cell invasion protein SipB (PF16535; HMM-score: 11.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.531
    • Cytoplasmic Membrane Score: 0.4347
    • Cell wall & surface Score: 0.0069
    • Extracellular Score: 0.0275
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.01321
    • TAT(Tat/SPI): 0.00322
    • LIPO(Sec/SPII): 0.001963
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MASLKEIDTRIKSTKKMKQITKAMNMVSSSKLRRAEKNTKQFTPYMDKMQDAITAVAGASSNTNHPMLRPRKITRSGYLVITSDKGLAGAYSANVLKKLITDIEAKHQDSSEYSIVVLGQQGVDFLKNRGYDIEYSQVDVPDQPSFKSVQALANHAIDLYSEEEIDELNIYYSHYVSVLENKPTSRQVLPLSQEDSSKGHGHLSSYEFEPDKESILSVILPQYVESLIYGTILDAKASEHATRMTAMKNATDNATELIDDLSLEYNRARQAEITQQITEIVGGSAALE

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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