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FunGene: 08-OCT-2024

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: JSNZ_001337
  • pan locus tag?: SAUPAN003740000
  • symbol: plsY
  • pan gene symbol?: plsY
  • synonym:
  • product: glycerol-3-phosphate 1-O-acyltransferase PlsY

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: JSNZ_001337
  • symbol: plsY
  • product: glycerol-3-phosphate 1-O-acyltransferase PlsY
  • replicon: chromosome
  • strand: -
  • coordinates: 1347199..1347807
  • length: 609
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Gene ID:
  • RefSeq:
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGATGATAATCGTCATGTTACTACTAAGTTATCTTATCGGCGCTTTCCCAAGTGGATTC
    GTAATTGGAAAATTATTTTTCAAAAAAGATATTAGACAATTTGGTAGTGGTAATACTGGC
    GCTACTAATAGCTTTAGAGTATTAGGTCGTCCTGCAGGATTCTTGGTAACATTTCTAGAT
    ATTTTCAAAGGGTTCATAACTGTTTTCTTCCCTTTATGGTTACCAGTTCACGCAGATGGC
    CCTATTAGTACTTTTTTTACAAATGGTTTAATTGTTGGCTTATTCGCTATACTTGGACAC
    GTTTATCCTGTTTATTTAAAATTCCAAGGTGGCAAAGCTGTTGCAACTAGTGCAGGTGTC
    GTCTTGGGAGTCAATCCGATACTTTTACTAATACTTGCAATTATCTTCTTTATTGTATTG
    AAGATTTTTAAATATGTTTCTTTAGCAAGTATCGTTGCAGCAATTTGCTGTGTGATTGGC
    TCGCTTATCATTCAAGACTATATTTTATTAGTCGTTAGTTTCTTAGTTTCAATCATATTG
    ATAATTAGACATCGCTCTAATATCGCAAGGATTTTTAGAGGCGAAGAACCTAAAATAAAA
    TGGATGTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    609

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: JSNZ_001337
  • symbol: PlsY
  • description: glycerol-3-phosphate 1-O-acyltransferase PlsY
  • length: 202
  • theoretical pI: 10.6347
  • theoretical MW: 22231.9
  • GRAVY: 1.16733

⊟Function[edit | edit source]

  • reaction:
    EC 2.3.1.15?  ExPASy
    Glycerol-3-phosphate 1-O-acyltransferase Acyl-CoA + sn-glycerol 3-phosphate = CoA + 1-acyl-sn-glycerol 3-phosphate
  • TIGRFAM:
    Metabolism Fatty acid and phospholipid metabolism Biosynthesis acyl-phosphate glycerol 3-phosphate acyltransferase (TIGR00023; EC 2.3.1.-; HMM-score: 199.7)
  • TheSEED: data available for COL, N315, NCTC8325, Newman, USA300_FPR3757
  • PFAM:
    no clan defined G3P_acyltransf; Glycerol-3-phosphate acyltransferase (PF02660; HMM-score: 181.3)
    and 1 more
    Ribophorin_II_C; Ribophorin_II, C-terminal domain (PF25147; HMM-score: 8.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9998
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0002
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.047773
    • TAT(Tat/SPI): 0.000894
    • LIPO(Sec/SPII): 0.040964
  • predicted transmembrane helices (TMHMM): 5

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MMIIVMLLLSYLIGAFPSGFVIGKLFFKKDIRQFGSGNTGATNSFRVLGRPAGFLVTFLDIFKGFITVFFPLWLPVHADGPISTFFTNGLIVGLFAILGHVYPVYLKFQGGKAVATSAGVVLGVNPILLLILAIIFFIVLKIFKYVSLASIVAAICCVIGSLIIQDYILLVVSFLVSIILIIRHRSNIARIFRGEEPKIKWM

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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