Jump to navigation
Jump to search
NCBI: 22-FEB-2026
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus JSNZ
- locus tag: EGJ38_RS08170 [old locus tag: EGJ38_001636 ]
- pan locus tag?: SAUPAN004252000
- symbol: EGJ38_RS08170
- pan gene symbol?: —
- synonym:
- product: ribosomal-processing cysteine protease Prp
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: EGJ38_RS08170 [old locus tag: EGJ38_001636 ]
- symbol: EGJ38_RS08170
- product: ribosomal-processing cysteine protease Prp
- replicon: chromosome
- strand: -
- coordinates: 1673163..1673483
- length: 321
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NZ_CM129921 (1673163..1673483) NCBI
- BioCyc:
- MicrobesOnline:
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301ATGATTACTGTTGATATTACAGTTAATGATGAAGGCAAAGTAACAGACGTTATTATGGAT
GGCCATGCTGACCATGGTGAATATGGTCATGATATCGTTTGTGCTGGAGCTTCAGCTGTA
TTGTTTGGTAGTGTTAATGCGATTATAGGATTGACATCTGAGAGACCAGATATCAATTAT
GACGACAATGGTGGTCATTTTCATATAAGAAGCGTTGATACAAACAACGATGAAGCGCAA
CTAATTCTTCAAACAATGCTTGTGTCTTTACAAACTATTGAAGAAGAATATAATGAGAAT
ATTAGATTAAATTATAAGTGA60
120
180
240
300
321
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: EGJ38_RS08170 [old locus tag: EGJ38_001636 ]
- symbol: EGJ38_RS08170
- description: ribosomal-processing cysteine protease Prp
- length: 106
- theoretical pI: 4.05297
- theoretical MW: 11691.8
- GRAVY: -0.250943
⊟Function[edit | edit source]
- reaction: EC 3.4.22.-? ExPASy
- TIGRFAM:
- TheSEED: data available for COL, N315, NCTC8325, Newman, USA300_FPR3757
- PFAM: no clan defined Peptidase_Prp; Cysteine protease Prp (PF04327; HMM-score: 86.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.9845
- Cytoplasmic Membrane Score: 0.0078
- Cell wall & surface Score: 0.0003
- Extracellular Score: 0.0074
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.015261
- TAT(Tat/SPI): 0.000866
- LIPO(Sec/SPII): 0.001304
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000633692 NCBI
- UniProt:
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
- MITVDITVNDEGKVTDVIMDGHADHGEYGHDIVCAGASAVLFGSVNAIIGLTSERPDINYDDNGGHFHIRSVDTNNDEAQLILQTMLVSLQTIEEEYNENIRLNYK
⊟Experimental data[edit | edit source]
- experimentally validated: data available for COL, NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]