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NCBI: 22-FEB-2026

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus JSNZ
  • locus tag: EGJ38_RS07975 [old locus tag: EGJ38_001597 ]
  • pan locus tag?: SAUPAN004204000
  • symbol: EGJ38_RS07975
  • pan gene symbol?: —
  • synonym:
  • product: 5-oxoprolinase subunit C family protein

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: EGJ38_RS07975 [old locus tag: EGJ38_001597 ]
  • symbol: EGJ38_RS07975
  • product: 5-oxoprolinase subunit C family protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1632030..1633040
  • length: 1011
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NZ_CM129921 (1632030..1633040) NCBI
  • BioCyc:
  • MicrobesOnline:

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
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    481
    541
    601
    661
    721
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    841
    901
    961
    ATGTCAATTAAGATTTTACAACCAGGTCTCTTTTCAACGGTACAAGATCTAGGAAGAAAA
    GGTTATGAACATATTGGATTTTCAGGCGCAGGTGCCATGGATCAATTTAGTTTTAAGGTT
    GCGCAGTCATTAATTAACAATGATGGTCCAGCGATTGAATATACTTTGATTGGTCCTACC
    ATTCAATTTAATACGCAAAATACATTTGTTATAACCGGTGGTAGTGTTAATGCTTCGCTA
    AATAATAGAACTATATCAATGAATTCTGTCATATTAGTTGAGAAAGGTGACATTTTAAAA
    ATAGGTGCTATAACCAAAGGTGCACGCGGTTATCTTACTTTTGGTCATTCTATCAACGTA
    CCTCCTATTGCTGAAAGTTATGCAACACATACCCGAAGCAGTATAGGAGGATTCAAAGGT
    AGAAAGTTATTAGCTAATGATGTAATAACAGTGAAAATAAATAATGACTTTAAAGAAAAC
    ATTGGAAAGACTATTCATTTACAGGACGATTTATTGCCAGAAAATAATATTATACACATT
    CTTCAAGGACCTCAATTCGAGGCATTTTCTGAAGAGGCTAGAGCGAAAATTGTAAATCAT
    CCATATTTAATTACTGAACAATCAGACCGTATGGGCTATCGTTTGGAAGGTGACAGCGTT
    GCACCAATTAATCAAGCAGATATCATTTCTGAACCGGTTGCTCTTGGTAGTGTTCAAGTA
    CCAAATGATGGTCAACCTATTATTCTGCTTAATGATAAACAAACGATAGGTGGTTATACC
    AAAATTGCAACTGTATGCAAATTTGATCTGCCAAAGTTAGCACAGATGAAACCACAAGAT
    ACAATTCAATTTAAATGGATATCATTCCAAGAAGCTGTAGATAAGAATCGGGAACAAATG
    TCTCTGTTTAATGAAATTCTTAAGAGTCATCAAAAGACTCCAATTTTTGATACATCTAGC
    TTGCGACATACTTCGAAAAAATTAGCAACAATTTTAAAAGGGGATTTGTAA
    60
    120
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    1011


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: EGJ38_RS07975 [old locus tag: EGJ38_001597 ]
  • symbol: EGJ38_RS07975
  • description: 5-oxoprolinase subunit C family protein
  • length: 336
  • theoretical pI: 8.42031
  • theoretical MW: 36968
  • GRAVY: -0.201786

⊟Function[edit | edit source]

  • reaction:
    EC 3.-.-.-?  ExPASy
  • TIGRFAM:
    Unknown function General biotin-dependent carboxylase uncharacterized domain (TIGR00724; HMM-score: 270.2)
    and 1 more
    Metabolism Central intermediary metabolism Nitrogen metabolism urea carboxylase (TIGR02712; EC 6.3.4.6; HMM-score: 171.5)
  • TheSEED: data available for COL, N315, NCTC8325, Newman, USA300_FPR3757
  • PFAM:
    Cyclophil-like (CL0475) CT_A_B; Carboxyltransferase domain, subdomain A and B (PF02626; HMM-score: 273.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.759
    • Cytoplasmic Membrane Score: 0.2284
    • Cell wall & surface Score: 0.0008
    • Extracellular Score: 0.0117
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.017826
    • TAT(Tat/SPI): 0.001465
    • LIPO(Sec/SPII): 0.0016
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000023334 NCBI
  • UniProt:

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSIKILQPGLFSTVQDLGRKGYEHIGFSGAGAMDQFSFKVAQSLINNDGPAIEYTLIGPTIQFNTQNTFVITGGSVNASLNNRTISMNSVILVEKGDILKIGAITKGARGYLTFGHSINVPPIAESYATHTRSSIGGFKGRKLLANDVITVKINNDFKENIGKTIHLQDDLLPENNIIHILQGPQFEAFSEEARAKIVNHPYLITEQSDRMGYRLEGDSVAPINQADIISEPVALGSVQVPNDGQPIILLNDKQTIGGYTKIATVCKFDLPKLAQMKPQDTIQFKWISFQEAVDKNREQMSLFNEILKSHQKTPIFDTSSLRHTSKKLATILKGDL

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]


⊟Relevant publications[edit | edit source]

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