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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0407 [new locus tag: SA_RS02325 ]
- pan locus tag?: SAUPAN002149000
- symbol: SA0407
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0407 [new locus tag: SA_RS02325 ]
- symbol: SA0407
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 466813..467136
- length: 324
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1123191 NCBI
- RefSeq: NP_373658 NCBI
- BioCyc: see SA_RS02325
- MicrobesOnline: 102684 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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121
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241
301ATGATGTTTAATCAAATTAATAATAAAAATGAATTAGAAGAATCATATGAATCTGAGAAA
AAACGTATAGAGAATGAACTGCATAATTTAAATGAACTTAGGCATAGAACTCGAAAAGAA
AATGAACGTAGTTATGATGTTTTTCAATATTTGAAGCACGAAATGAATTATAGTGAAGAT
GCCCAAAGGAAAATGACGAGAAATATAGAAGCGTATGAGCAAGAAATCAATGAGATAATT
AGAAAGCAAGAATGGAAATTAGAAGAATATAAAGAAGACTTAAAAAAGTCTTATGAAAAG
CAGTTAGATAAACTAAGTGACTGA60
120
180
240
300
324
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0407 [new locus tag: SA_RS02325 ]
- symbol: SA0407
- description: hypothetical protein
- length: 107
- theoretical pI: 5.12494
- theoretical MW: 13466.8
- GRAVY: -1.68972
⊟Function[edit | edit source]
- ⊞TIGRFAM: Cellular processes Cell division chromosome segregation protein SMC (TIGR02169; HMM-score: 9.7)DNA metabolism Chromosome-associated proteins chromosome segregation protein SMC (TIGR02169; HMM-score: 9.7)Cellular processes Cell division chromosome segregation protein SMC (TIGR02168; HMM-score: 7.9)DNA metabolism Chromosome-associated proteins chromosome segregation protein SMC (TIGR02168; HMM-score: 7.9)and 3 more
- TheSEED :
- FIG01107979: hypothetical protein
- ⊞PFAM: no clan defined Cluap1; Clusterin-associated protein-1 (PF10234; HMM-score: 16.2)ISG65-75; Invariant surface glycoprotein (PF11727; HMM-score: 14.5)dUTPase (CL0153) Herpes_U55; Human herpesvirus U55 protein (PF06501; HMM-score: 14.3)and 14 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MMFNQINNKNELEESYESEKKRIENELHNLNELRHRTRKENERSYDVFQYLKHEMNYSEDAQRKMTRNIEAYEQEINEIIRKQEWKLEEYKEDLKKSYEKQLDKLSD
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: lpl9 > SA0406 > SA0407 > SA0408
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available