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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1653 [new locus tag: SA_RS09345 ]
- pan locus tag?: SAUPAN004760000
- symbol: TRAP
- pan gene symbol?: traP
- synonym:
- product: signal transduction protein TRAP
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1653 [new locus tag: SA_RS09345 ]
- symbol: TRAP
- product: signal transduction protein TRAP
- replicon: chromosome
- strand: +
- coordinates: 1887575..1888078
- length: 504
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124504 NCBI
- RefSeq: NP_374942 NCBI
- BioCyc: see SA_RS09345
- MicrobesOnline: 103968 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGAAGAAACTATATACATCTTATGGCACTTATGGATTTTTACATCAAATAAAAATCAAT
AACCCGACCCATCAACTATTCCAATTTTCAGCATCAGATACTTCAGTTATTTTTGAAGAA
ACTGATGGTGAGACTGTTTTAAAATCACCTTCAATATATGAAGTTATTAAAGAAATTGGT
GAATTCAGTGAACATCATTTCTATTGTGCAATCTTCATTCCTTCAACAGAAGATCATGCA
TATCAACTTGAAAAGAAACTGATTAGTGTAGACGATAATTTCAGAAACTTTGGTGGCTTT
AAAAGCTATCGTTTGTTAAGACCTGCTAAAGGTACAACATATAAAATTTATTTCGGATTT
GCTGATCGACATGCATACGAAGACTTTAAGCAATCTGATGCCTTTAATGACCATTTTTCA
AAAGACGCATTAAGTCATTACTTTGGTTCAAGCGGACAACATTCAAGTTATTTTGAAAGA
TATCTATACCCAATAAAAGAATAG60
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504
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1653 [new locus tag: SA_RS09345 ]
- symbol: TRAP
- description: signal transduction protein TRAP
- length: 167
- theoretical pI: 6.60285
- theoretical MW: 19547.6
- GRAVY: -0.58024
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIGEFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGFADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available
⊞Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊞Other Information[edit | edit source]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Lindsey N Shaw, Ing-Marie Jonsson, Vineet K Singh, Andrej Tarkowski, George C Stewart
Inactivation of traP has no effect on the agr quorum-sensing system or virulence of Staphylococcus aureus.
Infect Immun: 2007, 75(9);4519-27
[PubMed:17548478] [WorldCat.org] [DOI] (P p)Laura H Tsang, Sonja T Daily, Elizabeth C Weiss, Mark S Smeltzer
Mutation of traP in Staphylococcus aureus has no impact on expression of agr or biofilm formation.
Infect Immun: 2007, 75(9);4528-33
[PubMed:17548479] [WorldCat.org] [DOI] (P p)