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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004760000
- symbol?: traP
- synonym:
- description?: signal transduction protein TRAP
- signal transduction protein TRAP
- RNAIII-activating protein TRAP
- signal transduction protein TRAP (Target of RNAIII-activatingprotein)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4974083..4974586
- synteny block?: BlockID0036920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1791 (yhgC)
08BA02176:
C248_1876 (trap)
11819-97:
MS7_1840 (traP)
6850:
RSAU_001694
71193:
ST398NM01_1900
ECT-R 2:
ECTR2_1677
ED133:
SAOV_1830 (traP)
ED98:
SAAV_1854
HO 5096 0412:
SAEMRSA15_17390 (trap)
JH1:
SaurJH1_1922
JH9:
SaurJH9_1888
JKD6008:
SAA6008_01792
JKD6159:
SAA6159_01763
LGA251:
SARLGA251_17180 (trap)
M013:
M013TW_1841
MRSA252:
SAR1926 (trap)
MSHR1132:
SAMSHR1132_16810
MSSA476:
SAS1756
Mu3:
SAHV_1820 (traP)
Mu50:
SAV1835 (traP)
MW2:
MW1775
RF122:
SAB1766 (traP)
ST398:
SAPIG1900
T0131:
SAT0131_01954
TCH60:
HMPREF0772_11310 (trap)
TW20:
SATW20_18290 (trap)
USA300_TCH1516:
USA300HOU_1827
VC40:
SAVC_08405
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
N315 MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
NCTC8325 MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
Newman MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
USA300_FPR3757 MKKLYTSYGTYGFLHQIKINNPTHQLFQFSASDTSVIFEETDGETVLKSPSIYEVIKEIG
************************************************************
COL EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
N315 EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
NCTC8325 EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
Newman EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
USA300_FPR3757 EFSEHHFYCAIFIPSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRPAKGTTYKIYFGF
************************************************************
COL ADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
N315 ADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
NCTC8325 ADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
Newman ADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
USA300_FPR3757 ADRHAYEDFKQSDAFNDHFSKDALSHYFGSSGQHSSYFERYLYPIKE
***********************************************