NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS13670 [old locus tag: SACOL2613 ]
- pan locus tag?: SAUPAN006281000
- symbol: SACOL_RS13670
- pan gene symbol?: panD
- synonym:
- product: aspartate 1-decarboxylase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS13670 [old locus tag: SACOL2613 ]
- symbol: SACOL_RS13670
- product: aspartate 1-decarboxylase
- replicon: chromosome
- strand: -
- coordinates: 2670366..2670737
- length: 372
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361ATGATGAATGCTAAAATTCATAGAGCAAGAGTGACTGAGTCAAATTTAAATTATGTAGGT
AGCATTACGATTGATTCAGATATATTGGAAGCGGTAGACATCTTGCCAAATGAAAAAGTA
GCCATCGTGAATAATAATAATGGTGCACGTTTTGAAACATACGTAATAGCTGGTGAAAGA
GGTAGTGGTAAAATTTGTTTAAACGGTGCAGCGTCAAGACTTGTTGAAGTAGGCGATGTA
GTCATAATCATGACTTATGCACAGTTGAATGAAGAAGAAATTAAAAACCATGCACCTAAA
GTAGCAGTAATGAATGAAGATAATGTCATTATTGAAATGATTCATGAAAAAGAAAATACG
ATAGTGTTATAA60
120
180
240
300
360
372
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS13670 [old locus tag: SACOL2613 ]
- symbol: SACOL_RS13670
- description: aspartate 1-decarboxylase
- length: 123
- theoretical pI: 4.6011
- theoretical MW: 13548.4
- GRAVY: -0.00731707
⊟Function[edit | edit source]
- ⊞reaction: EC 4.1.1.11? ExPASy
- ⊞TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriers Pantothenate and coenzyme A aspartate 1-decarboxylase (TIGR00223; EC 4.1.1.11; HMM-score: 172.6)and 1 more
- TheSEED: see SACOL2613
- ⊞PFAM: DPBB (CL0199) Asp_decarbox; Aspartate decarboxylase (PF02261; HMM-score: 168.6)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors: pyruvate
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MMNAKIHRARVTESNLNYVGSITIDSDILEAVDILPNEKVAIVNNNNGARFETYVIAGERGSGKICLNGAASRLVEVGDVVIIMTYAQLNEEEIKNHAPKVAVMNEDNVIIEMIHEKENTIVL
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available