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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS12495 [old locus tag: SA2177 ]
  • pan locus tag?: SAUPAN005918000
  • symbol: SA_RS12495
  • pan gene symbol?: —
  • synonym:
  • product: metallopeptidase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS12495 [old locus tag: SA2177 ]
  • symbol: SA_RS12495
  • product: metallopeptidase
  • replicon: chromosome
  • strand: +
  • coordinates: 2445829..2446743
  • length: 915
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (2445829..2446743) NCBI
  • BioCyc: SA_RS12495 BioCyc
  • MicrobesOnline: see SA2177

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGTATAAAATCAATATTATTAGATCAGATTCCGTCTATAAGAATATACTCAAGGCACCA
    ATAAACGACCGTGATTCAATTTTCACTAAAGAAATATTAGTACCTTTTAAAAAGAAATTT
    GAGGTACAACATATGCCTATTTATAATGATGACAAACAGACAATGAGTGCGATTCAATTT
    TTAGATGCCTTTCAAATTTCTCCCAAAGATTTACGCATGTCTGACCAAATGTCAATACAA
    TACCTGAATAATGATTTCTGGAGTAATTGCGAAAAATATTTAAAAGTTGCTATAGATCAA
    TTTTCAAATTATAGTATCTCATCTCAAGTTTCTAACTATCATTTCACAGTATTACTTGGA
    GATAGCCAAAAACCACTTATGTATCTAAATAAAAATCGCGGTGGTGATGGTGGCATACCA
    GGTTATATTATGATTTATTTAGTGCCGAGTACAAGTACAATTAATTCTATGAAAAGCTTA
    ATTGCACATGAAGTAAATCATAATATGCGCTATCAATATATTGATTGGGATGGCGGAAGT
    TTGATTGAATTGATTATTGCAGAAGGATTAGCTGAAAACTATGTAGAATCATTGTATGGT
    AAAGCGCATATTGGACCGTGGGTAACAAATACTAATTGGAGTCGTGATAACGTAAAAATT
    AAAAATACTATTTATAATCATTTACATTTAAAGCATATATTTGAATCGATGCCTTATCTC
    TATGGTGATGATATTAATAAACTTCAAGGTAGGCCTATCGTTGGCCTATCTCATGCTGCC
    GGGTATGCATGTGGCTATCACTTGGTAAAATACTTTTTACAAAAAACAAACATACCTATT
    GAAGTTGCTACAACACTTCCAGCACAAAAAATAATAAATGAGGTGACTGAATTTTGGCAT
    ACACATACACTTTAA
    60
    120
    180
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    300
    360
    420
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    915

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS12495 [old locus tag: SA2177 ]
  • symbol: SA_RS12495
  • description: metallopeptidase
  • length: 304
  • theoretical pI: 7.79427
  • theoretical MW: 35061.9
  • GRAVY: -0.287171

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Central intermediary metabolism Sulfur metabolism sulfite reductase, subunit B (TIGR02911; EC 1.8.-.-; HMM-score: 14.1)
  • TheSEED: see SA2177
  • PFAM:
    Peptidase_MA (CL0126) DUF2268; Predicted Zn-dependent protease (DUF2268) (PF10026; HMM-score: 155.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.7495
    • Cytoplasmic Membrane Score: 0.1195
    • Cell wall & surface Score: 0.0012
    • Extracellular Score: 0.1299
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.001622
    • TAT(Tat/SPI): 0.000143
    • LIPO(Sec/SPII): 0.000221
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MYKINIIRSDSVYKNILKAPINDRDSIFTKEILVPFKKKFEVQHMPIYNDDKQTMSAIQFLDAFQISPKDLRMSDQMSIQYLNNDFWSNCEKYLKVAIDQFSNYSISSQVSNYHFTVLLGDSQKPLMYLNKNRGGDGGIPGYIMIYLVPSTSTINSMKSLIAHEVNHNMRYQYIDWDGGSLIELIIAEGLAENYVESLYGKAHIGPWVTNTNWSRDNVKIKNTIYNHLHLKHIFESMPYLYGDDINKLQGRPIVGLSHAAGYACGYHLVKYFLQKTNIPIEVATTLPAQKIINEVTEFWHTHTL

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • data available for JSNZ

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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