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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS07925 [old locus tag: SA1403 ]
  • pan locus tag?: SAUPAN004157000
  • symbol: SA_RS07925
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS07925 [old locus tag: SA1403 ]
  • symbol: SA_RS07925
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1607794..1608477
  • length: 684
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (1607794..1608477) NCBI
  • BioCyc: SA_RS07925 BioCyc
  • MicrobesOnline: see SA1403

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGACAACTATCTTGGAATCAACGGCTGGAGATACTTGGGTTGAACAAGTTAGTAATATA
    ATTGTTCAACCTATTTTTACGTTAATATTAACCTGTTTGACATTCTTAGGATTTGTATAT
    CAACTTTACTCTAAAAAAATCAATGCAGCTGGTATTATCGCCACATTATCATTACTTATT
    TTATTTTTGGGATTTCTAATCCAAGGAAATGTCAATATGCATTCTATCTTAATATTCTCA
    ATTGGCGTTATATTAGTTGTAATTGAATTATTTGTAGTTGGTGCAGTAATTGGTATTATT
    GGCATGATACTGATAACTATAAACATAACAACGCTCGGTGATAATTTGCTATTTATGCTT
    GCGAATGTTATCGTTGCCTTGATTTTAACGATTGTAGAATGGGTGATATTAGTGAAGATT
    TTCAACAGAAAGATTCCGTTTTTGGATAAGGTTATCTTAAAAGATTCAACTAATTCTGAG
    TCAGGTTACAATTCTCATGATAACCGCTCGCACCTCGTAGGAAAGACTGCTCAAACAGTT
    ACAGATCTTCGACCTGCAGGGATTATTTTTTGTGAAAATGAACGTATTGATGCTGTTTCA
    GATGGCAACTTTATTTTACGCAATAAAACGGTGAAAATCCTTGAAGTTGAAGGAACAAGA
    GTAGTTGTGAGGGAAGTAGATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    684

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS07925 [old locus tag: SA1403 ]
  • symbol: SA_RS07925
  • description: hypothetical protein
  • length: 227
  • theoretical pI: 5.68735
  • theoretical MW: 25029.5
  • GRAVY: 0.831278

⊟Function[edit | edit source]

  • TIGRFAM:
    oligosaccharyl transferase, archaeosortase A system-associated (TIGR04154; EC 2.4.1.-; HMM-score: 2.9)
  • TheSEED: see SA1403
  • PFAM:
    no clan defined FAM70; FAM70 protein (PF14967; HMM-score: 10.4)
    KleE; Uncharacterized KleE stable inheritance protein (PF17394; HMM-score: 9.9)
    and 1 more
    Peptidase_MA (CL0126) DUF3810; Protein of unknown function (DUF3810) (PF12725; HMM-score: 5.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.01
    • Cytoplasmic Membrane Score: 9.35
    • Cellwall Score: 0.32
    • Extracellular Score: 0.32
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.000708
    • TAT(Tat/SPI): 0.000091
    • LIPO(Sec/SPII): 0.018434
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITINITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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