From AureoWiki
Jump to navigation Jump to search

NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS05810 [old locus tag: SA1019 ]
  • pan locus tag?: SAUPAN003443000
  • symbol: SA_RS05810
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS05810 [old locus tag: SA1019 ]
  • symbol: SA_RS05810
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1153884..1154324
  • length: 441
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (1153884..1154324) NCBI
  • BioCyc: SA_RS05810 BioCyc
  • MicrobesOnline: see SA1019

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGAGTGAAATCAAACGTCTTGAAATTAATTACAAAACTGACGAATTATTCGAAAACTTT
    AGAGCGTTTGGCAACAAAGACTTATACATGGTCAATGAGTTAAACGGTCAAATGATTGAT
    GCAAGTTCAGATTCACCATTTTATGGCATATTTGTCGGAGATCAATTAGGAGCTAGAATG
    GCATTACTAAAAAAAGGTGATGTCGAAGAAATCTACTTCCCAGATTTTGAAGATTATATA
    TTATTATGGAAGTTAGAAGTATTACCAAAATATCAAAACAGAGGGTACGCTTCAGAATTG
    ATTGATTTTGCAAAGAGTTTCAATATGCCAATTAAAGCCATTGGCAGAAATGATTCTAAG
    GATTTCTTTTTACATCATGGATTTACAGATGTGGAAGCTAAAAATATAGAGGGACATGAT
    GTCTTATTGTGGAAACCATAA
    60
    120
    180
    240
    300
    360
    420
    441

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS05810 [old locus tag: SA1019 ]
  • symbol: SA_RS05810
  • description: hypothetical protein
  • length: 146
  • theoretical pI: 4.61048
  • theoretical MW: 17002.2
  • GRAVY: -0.367123

⊟Function[edit | edit source]

  • reaction:
    EC 2.3.1.-?  ExPASy
  • TIGRFAM:
  • TheSEED: see SA1019
  • PFAM:
    Acetyltrans (CL0257) Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 26)
    Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 20.9)
    and 1 more
    Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 18.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.002428
    • TAT(Tat/SPI): 0.000268
    • LIPO(Sec/SPII): 0.000215
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSEIKRLEINYKTDELFENFRAFGNKDLYMVNELNGQMIDASSDSPFYGIFVGDQLGARMALLKKGDVEEIYFPDFEDYILLWKLEVLPKYQNRGYASELIDFAKSFNMPIKAIGRNDSKDFFLHHGFTDVEAKNIEGHDVLLWKP

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

Retrieved from "http://fungenwikiserver.biologie.uni-greifswald.de/aureowiki/index.php?title=SA_RS05810&oldid=97114"