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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

organism: Staphylococcus aureus USA300_FPR3757
locus tag: SAUSA300_RS13850 [old locus tag: SAUSA300_2493 ]
pan locus tag^?: SAUPAN006219000
symbol: SAUSA300_RS13850
pan gene symbol^?: cwrA
synonym:
product: hypothetical protein

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: CDS
locus tag: SAUSA300_RS13850 [old locus tag: SAUSA300_2493 ]
symbol: SAUSA300_RS13850
product: hypothetical protein
replicon: chromosome
strand: +
coordinates: 2696111..2696302
length: 192
essential: unknown other strains

⊟Accession numbers[edit | edit source]

Location: NC_007793 (2696111..2696302) NCBI
BioCyc: SAUSA300_RS13850 BioCyc
MicrobesOnline: see SAUSA300_2493

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

1
61
121
181
ATGAGAATATTAATTACAGGCACAGTTGCTATCTTAATCATTCTAGGTTTGGTCAAAACG
ATACAAGATTACGAAATGACAAACGACACGAGTCGTCAGTTGTCAGACAACAAAGATGAT
GATAAAGTCATCCATCTTAATAATTTTAAAAATTTACATGCGAAAGAATTTAACCCATCT
GATTTCTTTTAA
60
120
180
192

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: SAUSA300_RS13850 [old locus tag: SAUSA300_2493 ]
symbol: SAUSA300_RS13850
description: hypothetical protein
length: 63
theoretical pI: 5.58216
theoretical MW: 7266.26
GRAVY: -0.233333

⊟Function[edit | edit source]

TIGRFAM:
TheSEED: see SAUSA300_2493
PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:

⊟Localization[edit | edit source]

PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 9.87
- Cellwall Score: 0.12
- Extracellular Score: 0.01
- Internal Helix: 1
DeepLocPro: Extracellular
- Cytoplasmic Score: 0.0009
- Cytoplasmic Membrane Score: 0.4968
- Cell wall & surface Score: 0.0008
- Extracellular Score: 0.5015
LocateP:
SignalP: Signal peptide SP(Sec/SPI) length 20 aa
- SP(Sec/SPI): 0.461237
- TAT(Tat/SPI): 0.000815
- LIPO(Sec/SPII): 0.122821
- Cleavage Site: CS pos: 20-21. VKT-IQ. Pr: 0.0791
predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

GI: 447144148 NCBI
RefSeq: WP_001221404 NCBI
UniProt: see SAUSA300_2493

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

MRILITGTVAILIILGLVKTIQDYEMTNDTSRQLSDNKDDDKVIHLNNFKNLHAKEFNPSDFF

⊟Experimental data[edit | edit source]

experimentally validated: data available for NCTC8325
protein localization:
quantitative data / protein copy number per cell:
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

regulator: VraR see SAUSA300_2493

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: no data available

⊟Protein stability[edit | edit source]

half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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