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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS10730 [old locus tag: SAUSA300_1956 ]
- pan locus tag?: SAUPAN001393000
- symbol: SAUSA300_RS10730
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS10730 [old locus tag: SAUSA300_1956 ]
- symbol: SAUSA300_RS10730
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2114413..2114631
- length: 219
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2114413..2114631) NCBI
- BioCyc: SAUSA300_RS10730 BioCyc
- MicrobesOnline: see SAUSA300_1956
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGGATGCATTTGATAAATACTATCTATTTGATCATGACGGCAACAAAATGTTTTCAGTT
ACACCACATTTTAAAGATGGACGGCATTTAGTTGTTGGATTAAAACACACAAAATTCAAT
GGTCGACGTTGGTACTTAGATGATTATGAATTAAAAACACTTATTGATAATGAACAAATG
GAGTTAGGACACCAAACAAGCTTATTTGAATATATATGA60
120
180
219
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS10730 [old locus tag: SAUSA300_1956 ]
- symbol: SAUSA300_RS10730
- description: hypothetical protein
- length: 72
- theoretical pI: 6.34081
- theoretical MW: 8716.76
- GRAVY: -0.715278
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_1956
- PFAM: no clan defined DUF3269; Protein of unknown function (DUF3269) (PF11673; HMM-score: 14.3)CFIA_Pcf11; Subunit of cleavage factor IA Pcf11 (PF11526; HMM-score: 12.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001692
- TAT(Tat/SPI): 0.000099
- LIPO(Sec/SPII): 0.000311
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446260675 NCBI
- RefSeq: WP_000338530 NCBI
- UniProt: see SAUSA300_1956
⊟Protein sequence[edit | edit source]
- MDAFDKYYLFDHDGNKMFSVTPHFKDGRHLVVGLKHTKFNGRRWYLDDYELKTLIDNEQMELGHQTSLFEYI
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.