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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS08365 [old locus tag: SAUSA300_1534 ]
  • pan locus tag?: SAUPAN004157000
  • symbol: SAUSA300_RS08365
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_RS08365 [old locus tag: SAUSA300_1534 ]
  • symbol: SAUSA300_RS08365
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1683691..1684374
  • length: 684
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGACAACTATCTTGGAATCAACGGCTGGAGATACTTGGGTTGAACAAGTTAGCAATATA
    ATTGTTCAACCTATTTTTACGTTAATATTAACCTGTTTGACATTCTTAGGATTTGTATAT
    CAACTTTACTCTAAAAAAATCAATGCAGCTGGTATTATCGCCACATTATCATTACTTATT
    TTATTTTTGGGATTTCTAATCCAAGGAAATGTCAATATGCATTCTATCTTAATATTCTCA
    ATTGGCGTTATATTAGTTGTAATTGAATTATTTGTAGTTGGTGCAGTAATTGGTATTATT
    GGCATGATACTGATAACTATAAGCATAACAACGCTCGGTGATAATTTGCTATTTATGCTT
    GCGAATGTTATCGTTGCCTTGATTTTAACGATTGTAGAATGGGTGATATTAGTGAAGATT
    TTCAACAGAAAGATTCCGTTTTTGGATAAAGTTATCTTAAAAGATTCAACTAATTCTGAG
    TCAGGTTACAATTCTCATGATAACCGCTCGCACCTCGTAGGAAAGACTGCTCAAACAGTT
    ACAGATCTTCGACCTGCAGGGATTATTTTTTGTGAAAATGAACGTATTGATGCTGTTTCA
    GATGGCAACTTTATTTTGCGCAATAAAACGGTAAAAATCCTTGAAGTTGAAGGAACAAGA
    GTAGTTGTGAGGGAAGTAGATTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    684

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SAUSA300_RS08365 [old locus tag: SAUSA300_1534 ]
  • symbol: SAUSA300_RS08365
  • description: hypothetical protein
  • length: 227
  • theoretical pI: 5.68735
  • theoretical MW: 25002.5
  • GRAVY: 0.843172

⊟Function[edit | edit source]

  • TIGRFAM:
    oligosaccharyl transferase, archaeosortase A system-associated (TIGR04154; EC 2.4.1.-; HMM-score: 2.7)
  • TheSEED: see SAUSA300_1534
  • PFAM:
    no clan defined FAM70; FAM70 protein (PF14967; HMM-score: 9.8)
    and 2 more
    Competence; Competence protein (PF03772; HMM-score: 7.3)
    Peptidase_MA (CL0126) DUF3810; Protein of unknown function (DUF3810) (PF12725; HMM-score: 5.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.01
    • Cytoplasmic Membrane Score: 9.35
    • Cellwall Score: 0.32
    • Extracellular Score: 0.32
    • Internal Helices: 4
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.000708
    • TAT(Tat/SPI): 0.000091
    • LIPO(Sec/SPII): 0.018434
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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