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NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_1947 [new locus tag: SAUSA300_RS10680 ]
- pan locus tag?: SAUPAN001383000
- symbol: SAUSA300_1947
- pan gene symbol?: —
- synonym:
- product: phi77 ORF031-like protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_1947 [new locus tag: SAUSA300_RS10680 ]
- symbol: SAUSA300_1947
- product: phi77 ORF031-like protein
- replicon: chromosome
- strand: -
- coordinates: 2111138..2111524
- length: 387
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 3914109 NCBI
- RefSeq: YP_494598 NCBI
- BioCyc: see SAUSA300_RS10680
- MicrobesOnline: 1293462 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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361ATGATTAAAAAACTTAAAAATATGGATGGGTTCGACATCTTTATTGTTGGAATACTGTCA
TTATTCGGTATAACCGCATTGCTACTTGTTGTCGCATTGCCTATCTATACAGTGGCTAGT
TACCAAAACAAAGAAGTACATCAAGGGACAATTACAGATAAATATAACAAAAGACAAGAT
AAAGAGGACAAATTCTATATTGTATTAGATGATAAACAAGTCATCGAAAACTCAGACTTA
TTCTTCAAAGGAAAGTTTGATAGCGCAGACATACAAGCTAGGTTAAAAGTAGGTGATAAA
GTAAAAGTTAAGACGATTGGATATAGAATACACTTTTTAAATTTATATCCGGTCTTATAC
GAAGTAAAGAAGGTAGATAAAAAATGA60
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387
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_1947 [new locus tag: SAUSA300_RS10680 ]
- symbol: SAUSA300_1947
- description: phi77 ORF031-like protein
- length: 128
- theoretical pI: 9.92476
- theoretical MW: 14807.3
- GRAVY: -0.10625
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B]
- PFAM: no clan defined DUF1523; Protein of unknown function (DUF1523) (PF07509; HMM-score: 27.3)and 2 moreE-set (CL0159) CBM39; Carbohydrate binding domain (family 32) (PF15886; HMM-score: 14.2)no clan defined DUF3592; Protein of unknown function (DUF3592) (PF12158; HMM-score: 11.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 3.33
- Cellwall Score: 3.33
- Extracellular Score: 3.33
- Internal Helix: 1
- LocateP: N-terminally anchored (No CS)
- Prediction by SwissProt Classification: Membrane
- Pathway Prediction: Sec-(SPI)
- Intracellular possibility: 0.17
- Signal peptide possibility: 0
- N-terminally Anchored Score: 4
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.155446
- TAT(Tat/SPI): 0.00455
- LIPO(Sec/SPII): 0.012539
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MIKKLKNMDGFDIFIVGILSLFGITALLLVVALPIYTVASYQNKEVHQGTITDKYNKRQDKEDKFYIVLDDKQVIENSDLFFKGKFDSADIQARLKVGDKVKVKTIGYRIHFLNLYPVLYEVKKVDKK
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.