Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006323000
- symbol?: citM
- synonym:
- description?: citrate transporter
- citrate transporter
- CitMHS family transporter
- citrate transporter, permease
- citrate transporter, putative
- magnesium citrate secondary transporter
- CitMHS family citrate/H+ symporter
- CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+):proton (H+) symporter
- citrate/H+ symporter, CitMHS family
- citrate transporter, permease protein
- citrate transporter family protein
- putative transporter protein
- transporter protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6367090..6368460
- synteny block?: BlockID0050390
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2556
08BA02176:
C248_2680
11819-97:
MS7_2623
6850:
RSAU_002459
71193:
ST398NM01_2665
ECT-R 2:
ECTR2_2472
ED133:
SAOV_2664c
ED98:
SAAV_2684
HO 5096 0412:
SAEMRSA15_25220
JH1:
SaurJH1_2695
JH9:
SaurJH9_2641
JKD6008:
SAA6008_02675 (citM)
JKD6159:
SAA6159_02514 (citM)
LGA251:
SARLGA251_23900
M013:
M013TW_2596
MRSA252:
SAR2696
MSHR1132:
SAMSHR1132_24340
MSSA476:
SAS2504
Mu3:
SAHV_2602
Mu50:
SAV2618
MW2:
MW2538
RF122:
SAB2492c
ST398:
SAPIG2665
T0131:
SAT0131_02852
TCH60:
HMPREF0772_10572
TW20:
SATW20_27560
USA300_TCH1516:
USA300HOU_2615 (citM)
VC40:
SAVC_11955
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMILGYSVTDLVGFFAKGL
N315 MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMILGYSVTDLVGFFAKGL
NCTC8325 MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMILGYSVTDLVGFFAKGL
Newman MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMILGYSVTDLVGFFAKGL
USA300_FPR3757 MNSDNMWLTVMGLIIIISIVGLLIAKKINPVVGMTIIPCLGAMILGYSVTDLVGFFAKGL
************************************************************
COL DQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVVIVCAMTALIGTIAQLDGA
N315 DQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVVIVCAMTALIGTIAQLDGA
NCTC8325 DQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVVIVCAMTALIGTIAQLDGA
Newman DQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVVIVCAMTALIGTIAQLDGA
USA300_FPR3757 DQVINVVIMFIFAIIFFGIMNDSGLFKPLVKRLILMTRGNVVIVCAMTALIGTIAQLDGA
************************************************************
COL GAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMVPWGGPMARVAAVLKAKSVNE
N315 GAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMVPWGGPMARVAAVLKAKSVNE
NCTC8325 GAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMVPWGGPMARVAAVLKAKSVNE
Newman GAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMVPWGGPMARVAAVLKAKSVNE
USA300_FPR3757 GAVTFLLSIPALLPLYKALNMNKYLLILLLALSAAIMNMVPWGGPMARVAAVLKAKSVNE
************************************************************
COL LWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERNELPQTQDIDVHKLVEVYERDQD
N315 LWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERNELPQTQDIDVHKLVEVYERDQD
NCTC8325 LWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERNELPQTQDIDVHKLVEVYERDQD
Newman LWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERNELPQTQDIDVHKLVEVYERDQD
USA300_FPR3757 LWYGLIPIQIIGFILVMLFAVYLGFKEQKRIKKAIERNELPQTQDIDVHKLVEVYERDQD
************************************************************
COL VRFPVKGRARTKSWIKWVNTALTLAVILSMLINIAPPEFAFMIGVSLALVINFKSVDEQM
N315 VRFPVKGRARTKSWIKWVNTALTLAVILSMLINIAPPEFAFMIGVSLALVINFKSVDEQM
NCTC8325 VRFPVKGRARTKSWIKWVNTALTLAVILSMLINIAPPEFAFMIGVSLALVINFKSVDEQM
Newman VRFPVKGRARTKSWIKWVNTALTLAVILSMLINIAPPEFAFMIGVSLALVINFKSVDEQM
USA300_FPR3757 VRFPVKGRARTKSWIKWVNTALTLAVILSMLINIAPPEFAFMIGVSLALVINFKSVDEQM
************************************************************
COL ERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLKAIATNLIKVIPAEVGPYLHIIVGLLG
N315 ERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLKAIATNLIKVIPAEVGPYLHIIVGLLG
NCTC8325 ERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLKAIATNLIKVIPAEVGPYLHIIVGLLG
Newman ERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLKAIATNLIKVIPAEVGPYLHIIVGLLG
USA300_FPR3757 ERLRAHAPNALMMAAVIIAAGMFLGVLNETGMLKAIATNLIKVIPAEVGPYLHIIVGLLG
************************************************************
COL VPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSVSTAYSMVIGNIIGTFVSPFSPALWLAIG
N315 VPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSVSTAYSMVIGNIIGTFVSPFSPALWLAIG
NCTC8325 VPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSVSTAYSMVIGNIIGTFVSPFSPALWLAIG
Newman VPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSVSTAYSMVIGNIIGTFVSPFSPALWLAIG
USA300_FPR3757 VPLDLLTSTDAYYFAVLPIVEQTAGQFGVPSVSTAYSMVIGNIIGTFVSPFSPALWLAIG
************************************************************
COL LAEANMGTYIKYAFFWIWGFAIVMLVIAMLMGIVTI
N315 LAEANMGTYIKYAFFWIWGFAIVMLVIAMLMGIVTI
NCTC8325 LAEANMGTYIKYAFFWIWGFAIVMLVIAMLMGIVTI
Newman LAEANMGTYIKYAFFWIWGFAIVMLVIAMLMGIVTI
USA300_FPR3757 LAEANMGTYIKYAFFWIWGFAIVMLVIAMLMGIVTI
************************************