Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006321000
- symbol?: nrdG
- synonym:
- description?: anaerobic ribonucleoside-triphosphate reductase activating protein
- anaerobic ribonucleoside-triphosphate reductase activating protein
- anaerobic ribonucleotide reductase, small subunit
- anaerobic ribonucleotide reductase, small chain
- Ribonucleotide reductase of class III (anaerobic), activating protein
- anaerobic (class III) ribonucleotide reductase small subunit chain
- anaerobic ribonucleotide reductase activating protein
- anaerobic ribonucleotide reductase small subunit
- putative anaerobic ribonucleotide reductase activating protein
- pyruvate formate-lyase activating enzyme
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6364458..6364994
- synteny block?: BlockID0050370
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2554
08BA02176:
C248_2678 (nrdG)
11819-97:
MS7_2621 (nrdG)
6850:
RSAU_002457 (nrdG)
71193:
ST398NM01_2663
ECT-R 2:
ECTR2_2470 (nrdG)
ED133:
SAOV_2662c
ED98:
SAAV_2682 (nrdG)
HO 5096 0412:
SAEMRSA15_25200 (nrdG)
JH1:
SaurJH1_2693
JH9:
SaurJH9_2639
JKD6008:
SAA6008_02673 (nrdG)
JKD6159:
SAA6159_02512 (nrdG)
LGA251:
SARLGA251_23880 (nrdG)
M013:
M013TW_2594
MRSA252:
SAR2694 (nrdG)
MSHR1132:
SAMSHR1132_24320
MSSA476:
SAS2502
Mu3:
SAHV_2600
Mu50:
SAV2616
MW2:
MW2536
RF122:
SAB2490c (nrdG)
ST398:
SAPIG2663 (nrdG)
T0131:
SAT0131_02849 (fmtC)
TCH60:
HMPREF0772_10574 (nrdG)
TW20:
SATW20_27540 (nrdG)
USA300_TCH1516:
USA300HOU_2613 (nrdG)
VC40:
SAVC_11945
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MILLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCYNKASQKFRYGEKYTDE
N315 MTLLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCYNKASQKFRYGEKYTDE
NCTC8325 MILLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCYNKASQKFRYGEKYTDE
Newman MILLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCYNKASQKFRYGEKYTDE
USA300_FPR3757 MILLDIKQGQGYIAKIESNSFVDGEGVRCSVYVSGCPFNCVGCYNKASQKFRYGEKYTDE
* **********************************************************
COL ILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARFGNTKTIWVWTGFLYEYLA
N315 ILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARFGNTKTIWVWTGFLYEYLA
NCTC8325 ILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARFGNTKTIWVWTGFLYEYLA
Newman ILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARFGNTKTIWVWTGFLYEYLA
USA300_FPR3757 ILAEILDDCDHDYISGLSLLGGEPFCNLDITLNLVKAFRARFGNTKTIWVWTGFLYEYLA
************************************************************
COL NDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRIIDVQQSLSHARMIEYIVS
N315 NDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRIIDVQQSLSHARMIEYIVS
NCTC8325 NDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRIIDVQQSLSHARMIEYIVS
Newman NDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRIIDVQQSLSHARMIEYIVS
USA300_FPR3757 NDCTERRELLSYIDVLVDGLFIQHLFKPDLPYKGSLNQRIIDVQQSLSHARMIEYIVS
**********************************************************