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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006198000
- symbol?: cidA
- synonym:
- description?: holin-like protein CidA
- holin-like protein CidA
- effector of murein hydrolase LrgA, putative
- holin-like murein hydrolase modulator CidA
- LrgA family protein
- murein hydrolase exporter
- murein hydrolase regulator LrgA
- pseudogene
- putative murein hydrolase subunit LrgA_1
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6261046..6261387
- synteny block?: BlockID0049220
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2477
08BA02176:
C248_2598
11819-97:
MS7_2546
6850:
RSAU_002382 (cidA)
71193:
ST398NM01_2591
ECT-R 2:
ECTR2_2393
ED133:
SAOV_2585c
ED98:
SAAV_2607
HO 5096 0412:
SAEMRSA15_24440
JH1:
SaurJH1_2617
JH9:
SaurJH9_2564
JKD6008:
SAA6008_02578 (lrgA_1)
JKD6159:
SAA6159_02437 (lrgA_1)
LGA251:
SARLGA251_23160 (cidA)
M013:
M013TW_2513
MRSA252:
SAR2621
MSHR1132:
SAMSHR1132_23610
MSSA476:
SAS2427
Mu3:
SAHV_2525
Mu50:
SAV2541
MW2:
MW2462
RF122:
SAB2415c
ST398:
SAPIG2591
T0131:
SAT0131_02747 (glpF)
TCH60:
HMPREF0772_10650 (lrgA2)
TW20:
SATW20_26620 (cidA)
USA300_TCH1516:
USA300HOU_2533
VC40:
SAVC_11580
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFLFYLLLQFKIVPLTWVE
N315 MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFLFYLLLQFKIVPLTWVE
NCTC8325 MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFLFYLLLQFKIVPLTWVE
Newman MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFLFYLLLQFKIVPLTWVE
USA300_FPR3757 MHKVQLIIKLLLQLGIIIVITYIGTEIQKIFHLPLAGSIVGLFLFYLLLQFKIVPLTWVE
************************************************************
COL DGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIGTCIVALSSGYIAEKMSVK
N315 DGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIGTCIVALSSGYIAEKMSVK
NCTC8325 DGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIGTCIVALSSGYIAEKMSVK
Newman DGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIGTCIVALSSGYIAEKMSVK
USA300_FPR3757 DGANFLLKTMVFFFIPSVVGIMDVASEITLNYILFFAVIIIGTCIVALSSGYIAEKMSVK
************************************************************
COL HKHRKGVDAYE
N315 HKHRKGVDAYE
NCTC8325 HKHRKGVDAYE
Newman HKHRKGVDAYE
USA300_FPR3757 HKHRKGVDAYE
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