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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006151000
- symbol?: —
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- membrane spanning protein
- ABC-2 transporter family protein
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter ATP-binding protein
- lantibiotic protection ABC transporter permease subunit
- Membrane spanning protein, putative
- potential membrane spanning protein
- pseudogene
- putative membrane spanning protein
- transmembrane protein smpB
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6223151..6223715
- synteny block?: BlockID0048810
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2451
08BA02176:
C248_2572
11819-97:
MS7_2520
6850:
—
71193:
ST398NM01_2567
ECT-R 2:
ECTR2_2367
ED133:
SAOV_2559
ED98:
SAAV_2580
HO 5096 0412:
SAEMRSA15_24130
JH1:
SaurJH1_2590
JH9:
SaurJH9_2538
JKD6008:
SAA6008_02552
JKD6159:
SAA6159_02411
LGA251:
SARLGA251_22900
M013:
M013TW_2480
MRSA252:
SAR2595
MSHR1132:
SAMSHR1132_23360
MSSA476:
SAS2400
Mu3:
SAHV_2499
Mu50:
SAV2515
MW2:
MW2434
RF122:
SAB2389
ST398:
SAPIG2567
T0131:
SAT0131_02717
TCH60:
HMPREF0772_10679
TW20:
SATW20_26360
USA300_TCH1516:
USA300HOU_2504
VC40:
SAVC_11450
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MGTLIKQECFKLFKKKSTFIAPIVFILLMVAQGYIATKYNEIFTPQESFTSAYNGFSWFA
NCTC8325 MGTLIKQECFKLFKKKSTFIAPIVFILLMVAQGYIATKYNEIFTPQESFTSAYNGFSWFA
Newman MGTLIKQECFKLFKKKSTFIAPIVFILLMVAQGYIATKYNEIFTPQESFTSAYNGFSWFA
USA300_FPR3757 MGTLIKQECFKLFKKKSTFIAPIVFILLMVAQGYIATKYNEIFTPQESFTSAYNGFSWFA
************************************************************
N315 FLLIIQASTIISMEFHYGTIKNLLYREYSRTTMIVSKIITLFIISLIYFVITIIASIVIG
NCTC8325 FLLIIQASTIISMEFHYGTIKNLLYREYSRTTMIVSKIITLFIISLIYFVITIIASIVIG
Newman FLLIIQASTIISMEFHYGTIKNLLYREYSRTTMIVSKIITLFIISLIYFVITIIASIVIG
USA300_FPR3757 FLLIIQASTIISMEFHYGTIKNLLYREYSRTTMIVSKIITLFIISLIYFVITIIASIVIG
************************************************************
N315 SLFFNDLNIFESSGNQLSLLNQLLLVSLGTFVGVWLVLSLTLLLSSATNSTGVAIAVGIV
NCTC8325 SLFFNDLNIFESSGNQLSLLNQLLLVSLGTFVGVWLVLSLTLLLSSATNSTGVAIAVGIV
Newman SLFFNDLNIFESSGNQLSLLNQLLLVSLGTFVGVWLVLSLTLLLSSATNSTGVAIAVGIV
USA300_FPR3757 SLFFNDLNIFESSGNQLSLLNQLLLVSLGTFVGVWLVLSLTLLLSSATNSTGVAIAVGIV
************************************************************
N315 FYFASSILAVIQTALLEKIDWLKWNPINMMNIMLQTVEKGFSKSTKLELHELFIGNIAYI
NCTC8325 FYFASSILAVIQTALLEKIDWLKWNPINMMNIMLQTVEKGFSKSTKLELHELFIGNIAYI
Newman FYFASSILAVIQTALLEKIDWLKWNPINMMNIMLQTVEKGFSKSTKLELHELFIGNIAYI
USA300_FPR3757 FYFASSILAVIQTALLEKIDWLKWNPINMMNIMLQTVEKGFSKSTKLELHELFIGNIAYI
************************************************************
N315 SIFLILVVFIFKKKNI
NCTC8325 SIFLILVVFIFKKKNI
Newman SIFLILVVFIFKKKNI
USA300_FPR3757 SIFLILVVFIFKKKNI
****************