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Summary[edit | edit source]

  • pan ID?: SAUPAN005762000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: -
  • coordinates?: 5854571..5854897
  • synteny block?: BlockID0045080
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2234
    08BA02176:
    C248_2335
    11819-97:
    MS7_2314
    6850:
    RSAU_002129
    71193:
    ST398NM01_2346
    ECT-R 2:
    ECTR2_2156
    ED133:
    SAOV_2335c
    ED98:
    SAAV_2358
    HO 5096 0412:
    SAEMRSA15_21930
    JH1:
    SaurJH1_2363
    JH9:
    SaurJH9_2320
    JKD6008:
    SAA6008_02332
    JKD6159:
    SAA6159_02200
    LGA251:
    SARLGA251_20790
    M013:
    M013TW_2253
    MRSA252:
    SAR2380
    MSHR1132:
    SAMSHR1132_21210
    MSSA476:
    SAS2186
    Mu3:
    SAHV_2280
    Mu50:
    SAV2296
    MW2:
    MW2214
    RF122:
    SAB2168c
    ST398:
    SAPIG2346
    T0131:
    SAT0131_02475 (pheS)
    TCH60:
    HMPREF0772_10902
    TW20:
    SATW20_24270
    USA300_TCH1516:
    USA300HOU_2277
    VC40:
    SAVC_10340

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNERLIMNVDMNGQFYYRS
    N315            MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNERLIMNVDMNGQFYYRS
    NCTC8325        MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNERLIMNVDMNGQFYYRS
    Newman          MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNERLIMNVDMNGQFYYRS
    USA300_FPR3757  MILDNVNPNDLFPTEKKGPSVLGIIEYQVQGENEFEGAFIATNERLIMNVDMNGQFYYRS
                    ************************************************************

    COL             ISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSANVEMFVEYVKQHMIV
    N315            ISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSDNVEMFVEYVKQHMIV
    NCTC8325        ISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSANVEMFVEYVKQHMIV
    Newman          ISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSANVEMFVEYVKQHMIV
    USA300_FPR3757  ISYNEIEKIDYDGQTIMFKFNIGNVPMHDIKSANVEMFVEYVKQHMIV
                    ******************************** ***************