Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005693000
- symbol?: rpsQ
- synonym:
- description?: 30S ribosomal protein S17
- 30S ribosomal protein S17
- 30S ribosomal protein S17 (BS16)
- 30S ribosomal protein S17p (S11e)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5806251..5806514
- synteny block?: BlockID0044390
- occurrence?: in 100% of 34 strains
rpsQ : 30S ribosomal protein S17 [1]
• two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S17 is also known as "uS17" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2179 (rpsQ)
08BA02176:
C248_2277 (rpsQ)
11819-97:
MS7_2261 (rpsQ)
6850:
RSAU_002077 (rpsQ)
71193:
ST398NM01_2294
ECT-R 2:
ECTR2_2103
ED133:
SAOV_2278c
ED98:
SAAV_2303 (rpsQ)
HO 5096 0412:
SAEMRSA15_21400 (rpsQ)
JH1:
SaurJH1_2309 (rpsQ)
JH9:
SaurJH9_2268 (rpsQ)
JKD6008:
SAA6008_02278 (rpsQ)
JKD6159:
SAA6159_02148 (rpsQ)
JSNZ:
JSNZ_002205 (rpsQ)
LGA251:
SARLGA251_20270 (rpsQ)
M013:
M013TW_2200
MRSA252:
SAR2326 (rpsQ)
MSHR1132:
SAMSHR1132_20670
MSSA476:
SAS2132 (rpsQ)
Mu3:
SAHV_2225 (rpsQ)
Mu50:
SAV2241 (rpsQ)
MW2:
MW2160 (rpsQ)
RF122:
SAB2113c (rpsQ)
ST398:
SAPIG2294 (rpsQ)
T0131:
SAT0131_02414
TCH60:
HMPREF0772_10957 (rpsQ)
TW20:
SATW20_23750 (rpsQ)
USA300_TCH1516:
USA300HOU_2232 (rpsQ)
VC40:
SAVC_10075 (rpsQ)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
N315 MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
NCTC8325 MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
Newman MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
USA300_FPR3757 MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDI
************************************************************
COL VKIQETRPLSATKRFRLVEIVEESVII
N315 VKIQETRPLSATKRFRIVEIVEESVII
NCTC8325 VKIQETRPLSATKRFRLVEIVEESVII
Newman VKIQETRPLSATKRFRLVEIVEESVII
USA300_FPR3757 VKIQETRPLSATKRFRLVEIVEESVII
****************:**********
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)