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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005688000
- symbol?: rpsH
- synonym:
- description?: 30S ribosomal protein S8
- 30S ribosomal protein S8
- 30S ribosomal protein S8 (BS8)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5804294..5804692
- synteny block?: BlockID0044340
- occurrence?: in 100% of 34 strains
rpsH : 30S ribosomal protein S8 [1]
• two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S8 is also known as "uS8" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2174 (rpsH)
08BA02176:
C248_2272 (rpsH)
11819-97:
MS7_2256 (rpsH)
6850:
RSAU_002072 (rpsH)
71193:
ST398NM01_2289
ECT-R 2:
ECTR2_2098
ED133:
SAOV_2273c
ED98:
SAAV_2298 (rpsH)
HO 5096 0412:
SAEMRSA15_21350 (rpsH)
JH1:
SaurJH1_2304 (rpsH)
JH9:
SaurJH9_2263 (rpsH)
JKD6008:
SAA6008_02273 (rpsH)
JKD6159:
SAA6159_02143 (rpsH)
JSNZ:
JSNZ_002200 (rpsH)
LGA251:
SARLGA251_20220 (rpsH)
M013:
M013TW_2196
MRSA252:
SAR2321 (rpsH)
MSHR1132:
SAMSHR1132_20620
MSSA476:
SAS2127 (rpsH)
Mu3:
SAHV_2220 (rpsH)
Mu50:
SAV2236 (rpsH)
MW2:
MW2155 (rpsH)
RF122:
SAB2108c (rpsH)
ST398:
SAPIG2289 (rpsH)
T0131:
SAT0131_02409
TCH60:
HMPREF0772_10962 (rpsH)
TW20:
SATW20_23700 (rpsH)
USA300_TCH1516:
USA300HOU_2227 (rpsH)
VC40:
SAVC_10050 (rpsH)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVL
N315 MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVL
NCTC8325 MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVL
Newman MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVL
USA300_FPR3757 MTMTDPIADMLTRVRNANMVRHEKLELPASNIKKEIAEILKSEGFIKNVEYVEDDKQGVL
************************************************************
COL RLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARK
N315 RLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARK
NCTC8325 RLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARK
Newman RLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARK
USA300_FPR3757 RLFLKYGQNDERVITGLKRISKPGLRVYAKASEMPKVLNGLGIALVSTSEGVITDKEARK
************************************************************
COL RNVGGEIIAYVW
N315 RNVGGEIIAYVW
NCTC8325 RNVGGEIIAYVW
Newman RNVGGEIIAYVW
USA300_FPR3757 RNVGGEIIAYVW
************
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)