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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005686000
- symbol?: rplR
- synonym:
- description?: 50S ribosomal protein L18
- strand?: -
- coordinates?: 5803342..5803701
- synteny block?: BlockID0044320
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2172 (rplR)
08BA02176:
C248_2270 (rplR)
11819-97:
MS7_2254 (rplR)
6850:
RSAU_002070 (rplR)
71193:
ST398NM01_2287
ECT-R 2:
ECTR2_2096 (rplR)
ED133:
SAOV_2271c
ED98:
SAAV_2296 (rplR)
HO 5096 0412:
SAEMRSA15_21330 (rplR)
JH1:
SaurJH1_2302 (rplR)
JH9:
SaurJH9_2261 (rplR)
JKD6008:
SAA6008_02271 (rplR)
JKD6159:
SAA6159_02141 (rplR)
LGA251:
SARLGA251_20200 (rplR)
M013:
M013TW_2194
MRSA252:
SAR2319 (rplR)
MSHR1132:
SAMSHR1132_20600
MSSA476:
SAS2125 (rplR)
Mu3:
SAHV_2218 (rplR)
Mu50:
SAV2234 (rplR)
MW2:
MW2153 (rplR)
RF122:
SAB2106c (rplR)
ST398:
SAPIG2287 (rplR)
T0131:
SAT0131_02407
TCH60:
HMPREF0772_10964 (rplR)
TW20:
SATW20_23680 (rplR)
USA300_TCH1516:
USA300HOU_2225 (rplR)
VC40:
SAVC_10040 (rplR)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKD
N315 MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKD
NCTC8325 MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKD
Newman MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKD
USA300_FPR3757 MISKIDKNKVRLKRHARVRTNLSGTAEKPRLNVYRSNKHIYAQIIDDNKGVTLAQASSKD
************************************************************
COL SDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF
N315 SDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF
NCTC8325 SDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF
Newman SDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF
USA300_FPR3757 SDIATTATKVELATKVGEAIAKKAADKGIKEIVFDRGGYLYHGRVKALAEAARESGLEF
***********************************************************