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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005677000
- symbol?: rpsK
- synonym:
- description?: 30S ribosomal protein S11
- 30S ribosomal protein S11
- 30S ribosomal protein S11 (BS11)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5798802..5799191
- synteny block?: BlockID0044230
- occurrence?: in 100% of 34 strains
rpsK : 30S ribosomal protein S11 [1]
• two crystal structures are available : 6YEF , 8BH6
Staphylococcal 30S ribosomal protein S11 is also known as "uS11" by the universal ribosomal protein nomenclature harmonization system. [2]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2163 (rpsK)
08BA02176:
C248_2261 (rpsK)
11819-97:
MS7_2245 (rpsK)
6850:
RSAU_002061 (rpsK)
71193:
ST398NM01_2278
ECT-R 2:
ECTR2_2087
ED133:
SAOV_2263c
ED98:
SAAV_2287 (rpsK)
HO 5096 0412:
SAEMRSA15_21240 (rpsK)
JH1:
SaurJH1_2293
JH9:
SaurJH9_2252
JKD6008:
SAA6008_02262 (rpsK)
JKD6159:
SAA6159_02132 (rpsK)
JSNZ:
JSNZ_002189 (rpsK)
LGA251:
SARLGA251_20110 (rpsK)
M013:
M013TW_2185
MRSA252:
SAR2310 (rpsK)
MSHR1132:
SAMSHR1132_20510
MSSA476:
SAS2116
Mu3:
SAHV_2209 (rpsK)
Mu50:
SAV2225 (rpsK)
MW2:
MW2144 (rpsK)
RF122:
SAB2098c (rpsK)
ST398:
SAPIG2278 (rpsK)
T0131:
SAT0131_02398 (ptsH)
TCH60:
HMPREF0772_10973 (rpsK)
TW20:
SATW20_23590 (rpsK)
USA300_TCH1516:
USA300HOU_2216 (rpsK)
VC40:
SAVC_09995
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP
N315 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP
NCTC8325 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP
Newman MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP
USA300_FPR3757 MARKQVSRKRRVKKNIENGVAHIRSTFNNTIVTITDEFGNALSWSSAGALGFKGSKKSTP
************************************************************
COL FAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG
N315 FAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG
NCTC8325 FAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG
Newman FAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG
USA300_FPR3757 FAAQMASETASKSAMEHGLKTVEVTVKGPGPGRESAIRALQSAGLEVTAIRDVTPVPHNG
************************************************************
COL CRPPKRRRV
N315 CRPPKRRRV
NCTC8325 CRPPKRRRV
Newman CRPPKRRRV
USA300_FPR3757 CRPPKRRRV
*********
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p) - ↑ Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton, Michael A McAlear, Peter B Moore, Harry F Noller, Joaquin Ortega, Vikram Govind Panse, V Ramakrishnan, Christian M T Spahn, Thomas A Steitz, Marek Tchorzewski, David Tollervey, Alan J Warren, James R Williamson, Daniel Wilson, Ada Yonath, Marat Yusupov
A new system for naming ribosomal proteins.
Curr Opin Struct Biol: 2014, 24;165-9
[PubMed:24524803] [WorldCat.org] [DOI] (I p)