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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005427000
- symbol?: —
- synonym:
- description?: DUF2750 domain-containing protein
- DUF2750 domain-containing protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5585469..5586141
- synteny block?: BlockID0042220
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2071
08BA02176:
C248_2146
11819-97:
MS7_2149
6850:
RSAU_001969
71193:
ST398NM01_2173
ECT-R 2:
ECTR2_1987
ED133:
SAOV_2172c
ED98:
SAAV_2186
HO 5096 0412:
SAEMRSA15_20390
JH1:
SaurJH1_2205
JH9:
SaurJH9_2167
JKD6008:
SAA6008_02169
JKD6159:
SAA6159_02045
LGA251:
SARLGA251_19320
M013:
M013TW_2090
MRSA252:
SAR2219
MSHR1132:
SAMSHR1132_19540
MSSA476:
SAS2034
Mu3:
SAHV_2115
Mu50:
SAV2131
MW2:
MW2055
RF122:
SAB2015c
ST398:
SAPIG2173
T0131:
SAT0131_02295 (ppnK)
TCH60:
HMPREF0772_11059
TW20:
SATW20_22690
USA300_TCH1516:
USA300HOU_2120
VC40:
SAVC_09530
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
N315 MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
NCTC8325 MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
Newman MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
USA300_FPR3757 MSYKAYPFFRDILINECIYFASKNKKLVRLNYKSEAYVGVWTEESVAVSFLTSRDIPFDK
************************************************************
COL VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
N315 VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
NCTC8325 VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
Newman VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
USA300_FPR3757 VVKMDVDRFATYELDELFDEQDHIIMNQTMEEEGHLLNVVAVTQEVMTELDKIRIKEFVQ
************************************************************
COL DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
N315 DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
NCTC8325 DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
Newman DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
USA300_FPR3757 DVAKYDEVYGLTKKGSKQFILISENDSDEKKPHIMPVWSIKNRALKVRDEDFEECDLITI
************************************************************
COL EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
N315 EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
NCTC8325 EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
Newman EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
USA300_FPR3757 EGSVFGEWLDELRDDHKAVAIDLKTGVVGTIVSAQKLSNELTF
*******************************************