Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005403000
- symbol?: upp
- synonym:
- description?: uracil phosphoribosyltransferase
- strand?: -
- coordinates?: 5563842..5564471
- synteny block?: BlockID0041990
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2052 (upp)
08BA02176:
C248_2126 (upp)
11819-97:
MS7_2128 (upp)
6850:
RSAU_001950 (upp)
71193:
ST398NM01_2154
ECT-R 2:
ECTR2_1968 (upp)
ED133:
SAOV_2153c (upp)
ED98:
SAAV_2167 (upp)
HO 5096 0412:
SAEMRSA15_20200 (upp)
JH1:
SaurJH1_2186 (upp)
JH9:
SaurJH9_2148 (upp)
JKD6008:
SAA6008_02150 (upp)
JKD6159:
SAA6159_02026 (upp)
LGA251:
SARLGA251_19130 (upp)
M013:
M013TW_2071
MRSA252:
SAR2200 (upp)
MSHR1132:
SAMSHR1132_19350
MSSA476:
SAS2015 (upp)
Mu3:
SAHV_2096 (upp)
Mu50:
SAV2112 (upp)
MW2:
MW2036 (upp)
RF122:
SAB1996c (upp)
ST398:
SAPIG2154 (upp)
T0131:
SAT0131_02274 (appF)
TCH60:
HMPREF0772_11079 (upp)
TW20:
SATW20_22500 (upp)
USA300_TCH1516:
USA300HOU_2102 (upp)
VC40:
SAVC_09435 (upp)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVT
N315 MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVT
NCTC8325 MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVT
Newman MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVT
USA300_FPR3757 MSKVHVFDHPLIQHKLSYIRDVNTGTKEFRELVDEVGMLMAYEVTRDLELQDVDIETPVT
************************************************************
COL KMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQ
N315 KMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQ
NCTC8325 KMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQ
Newman KMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQ
USA300_FPR3757 KMTAKRLAGKKLAIVPILRAGLGMTDGILSLVPAARVGHIGLYRDPETLKAVEYFAKLPQ
************************************************************
COL DITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIY
N315 DITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIY
NCTC8325 DITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIY
Newman DITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIY
USA300_FPR3757 DITERQIIVVDPMLATGASAIEAITSLKKRGAKNIRFMCLIAAPEGVEKMHEAHPDVDIY
************************************************************
COL IAALDEKLNDKAYITPGLGDAGDRLFGTK
N315 IAALDEKLNDKAYITPGLGDAGDRLFGTK
NCTC8325 IAALDEKLNDKAYITPGLGDAGDRLFGTK
Newman IAALDEKLNDKAYITPGLGDAGDRLFGTK
USA300_FPR3757 IAALDEKLNDKAYITPGLGDAGDRLFGTK
*****************************