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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005341000
- symbol?: alr
- synonym:
- description?: alanine racemase
- alanine racemase
- alanine racemase 1
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5515635..5516753
- synteny block?: BlockID0041380
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2011 (alr)
08BA02176:
C248_2082 (alr)
11819-97:
MS7_2087 (alr)
6850:
RSAU_001910 (alr2)
71193:
ST398NM01_2111
ECT-R 2:
ECTR2_1926 (alr)
ED133:
SAOV_2112c (alr_1)
ED98:
SAAV_2123 (alr)
HO 5096 0412:
SAEMRSA15_19800 (alr)
JH1:
SaurJH1_2145
JH9:
SaurJH9_2107
JKD6008:
SAA6008_02109 (alr)
JKD6159:
SAA6159_01985 (alr)
LGA251:
SARLGA251_18730 (alr)
M013:
M013TW_2029
MRSA252:
SAR2158 (alr)
MSHR1132:
SAMSHR1132_18950
MSSA476:
SAS1975
Mu3:
SAHV_2055 (alr)
Mu50:
SAV2070 (alr)
MW2:
MW1994 (alr)
RF122:
SAB1955c (alr)
ST398:
SAPIG2111 (alr)
T0131:
SAT0131_02227 (rocD)
TCH60:
HMPREF0772_11125 (alr)
TW20:
SATW20_22100 (alr)
USA300_TCH1516:
USA300HOU_2065 (alr2)
VC40:
SAVC_09235
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGAT
N315 MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGAT
NCTC8325 MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGAT
Newman MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGAT
USA300_FPR3757 MSDKYYRSAYMNVDLNAVASNFKVFSTLHPNKTVMAVVKANAYGLGSVKVARHLMENGAT
************************************************************
COL FFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG
N315 FFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG
NCTC8325 FFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG
Newman FFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG
USA300_FPR3757 FFAVATLDEAIELRMHGITAKILVLGVLPAKDIDKAIQHRVALTVPSKQWLKEAIKNISG
************************************************************
COL EQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTT
N315 EQEKKLWLHIKLDTGMGRLGIKDTNTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTT
NCTC8325 EQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTT
Newman EQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTT
USA300_FPR3757 EQEKKLWLHIKLDTGMGRLGIKDTKTYQEVIEIIQQYEQLVFEGVFTHFACADEPGDMTT
************************:***********************************
COL EQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH
N315 EQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH
NCTC8325 EQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH
Newman EQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH
USA300_FPR3757 EQYQRFKDMVNEAIKPEYIHCQNSAGSLLMDCQFCNAIRPGISLYGYYPSEYVQQKVKVH
************************************************************
COL LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVN
N315 LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVN
NCTC8325 LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVN
Newman LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVN
USA300_FPR3757 LKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQGSFVNVN
************************************************************
COL GHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL
N315 GHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL
NCTC8325 GHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL
Newman GHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL
USA300_FPR3757 GHQCEVIGRVCMDQTIVKVPDQVKAGDSVILIDNHRESPQSVEVVAEKQHTINYEVLCNL
************************************************************
COL SRRLPRIYHDGDQRFVTNELLK
N315 SRRLPRIYHDGDQRFVTNELLK
NCTC8325 SRRLPRIYHDGDQRFVTNELLK
Newman SRRLPRIYHDGDQRFVTNELLK
USA300_FPR3757 SRRLPRIYHDGDQRFVTNELLK
**********************