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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005336000
- symbol?: rsbU
- synonym:
- description?: serine phosphatase
- serine phosphatase
- PP2C family protein-serine/threonine phosphatase
- sigma-B regulation protein
- sigmaB regulation protein RsbU
- sigma-B regulation protein serine phosphatase RsbU
- sigma factor B regulator protein
- sigma factor sigB regulation protein
- phosphoserine phosphatase rsbU (Sigma factor sigBregulation protein rsbU)
- indirect positive regulator of sigma B
- putative sigma factor sigB regulation protein
- Serine phosphatase RsbU, regulator of sigma subunit
- sigma factor B regulation protein
- stage II sporulation E family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5513670..5514469
- synteny block?: BlockID0041330
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2008 (rsbU)
08BA02176:
C248_2078 (rsbU)
11819-97:
MS7_2084 (rsbU)
6850:
RSAU_001907 (rsbU)
71193:
ST398NM01_2108
ECT-R 2:
ECTR2_1923
ED133:
SAOV_2109c
ED98:
SAAV_2120 (rsbU)
HO 5096 0412:
SAEMRSA15_19770 (rsbU)
JH1:
SaurJH1_2141
JH9:
SaurJH9_2104
JKD6008:
SAA6008_02106 (rsbU)
JKD6159:
SAA6159_01982 (rsbU)
LGA251:
SARLGA251_18700 (rsbU)
M013:
M013TW_2026
MRSA252:
SAR2155 (rsbU)
MSHR1132:
SAMSHR1132_18920
MSSA476:
SAS1972
Mu3:
SAHV_2052 (rsbU)
Mu50:
SAV2067 (rsbU)
MW2:
MW1991 (rsbU)
RF122:
SAB1952c (rsbU)
ST398:
SAPIG2108
T0131:
SAT0131_02224
TCH60:
HMPREF0772_11128 (rsbU)
TW20:
SATW20_22070 (rsbU)
USA300_TCH1516:
USA300HOU_2062 (rsbU)
VC40:
SAVC_09215
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLTR
N315 MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLTR
Newman MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLTR
USA300_FPR3757 MEEFKQHYKGLIDESLTCQDKVELIKKCEKYTDEVIRKDVLPEDIVDIHKNYILTLNLTR
************************************************************
COL EDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLASSLQQTMLKTDIPQFDSIQ
N315 EDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLASSLQQTMLKTDIPQFDSIQ
Newman EDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLASSLQQTMLKTDIPQFDSIQ
USA300_FPR3757 EDVFKTLDVLQEIVKGFGYSYRDYQRLVDKLQVHDKEIDLASSLQQTMLKTDIPQFDSIQ
************************************************************
COL IGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLP
N315 IGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLP
Newman IGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLP
USA300_FPR3757 IGVISVAAQKVSGDYFNLIDHNDGTMSFAVADVIGKGIPAALAMSMIKFGMDSYGHSQLP
************************************************************
COL SDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAEKEEFEEISV
N315 SDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAEKEEFEEISV
Newman SDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAEKEEFEEISV
USA300_FPR3757 SDGLKRLNRVVEKNINQNMFVTMFYGLYEEMNHLLYCSSAGHEPGYIYRAEKEEFEEISV
************************************************************
COL RGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEARNSEGTFIDKQKLLEYIKKHKHMH
N315 RGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEARNSEGTFIDKQKLLEYIKKHKHMH
Newman RGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEARNSEGTFIDKQKLLEYIKKHKHMH
USA300_FPR3757 RGRVLGISSQTRYQQQEIPIYLDDLIIILTDGVTEARNSEGTFIDKQKLLEYIKKHKHMH
************************************************************
COL PQDIVQIIYEAILKLQNPNKKDDMTILIIKRVN
N315 PQDIVQIIYEAILKLQNPNKKDDMTILIIKRVN
Newman PQDIVQIIYEAILKLQNPNKKDDMTILIIKRVN
USA300_FPR3757 PQDIVQIIYEAILKLQNPNKKDDMTILIIKRVN
*********************************