PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005106000
• symbol^?: —
• synonym:
• description^?: phi PVL orf 39-like protein

  descriptions from strain specific annotations:

  • phi PVL orf 39-like protein
  • phage protein
• strand^?: -
• coordinates^?: 5255530..5255931
• synteny block^?: BlockID0039610
• occurrence^?: in 36% of 33 strains

⊟Orthologs

COL:
—
N315:
SA1797
NCTC8325:
SAOUHSC_02223
Newman:
—
USA300_FPR3757:
—
04-02981:
SA2981_1949
08BA02176:
—
11819-97:
MS7_2021
6850:
—
71193:
ST398NM01_2947
ECT-R 2:
ECTR2_1860
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_19110
JH1:
SaurJH1_2081
JH9:
SaurJH9_2044
JKD6008:
—
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR2088
MSHR1132:
—
MSSA476:
SAS1909
Mu3:
—
Mu50:
—
MW2:
MW1926
RF122:
—
ST398:
—
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
—
VC40:
—

⊟Genome Viewer

N315
NCTC8325

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MYYKTGDVCRKIFNVDGFDFQLRVKKRAYSVEIVVLDHEGNSIDGLLVSDENDLYTALDI
  NCTC8325        MYYKIGDVCQKVINVDGFDFKLAVKKQDYSILVNVLDLEDRFIDGINITDENDLYTALDI
                  **** ****:*::*******:* ***: **: : *** *.. ***: ::***********
  
  N315            LKQSIYEWIENNTDEQDRLINLVMKW
  NCTC8325        LNQSIYEWIEENTDERDRLINLVMRW
                  *:********:****:********:*