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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005004000
- symbol?: aspB
- synonym:
- description?: aminotransferase, putative
- aminotransferase, putative
- aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
- Aspartate aminotransferase
- aspartate transaminase
- class I and II aminotransferase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5183200..5184486
- synteny block?: BlockID0038850
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1894
08BA02176:
C248_2024
11819-97:
MS7_1971
6850:
RSAU_001831
71193:
ST398NM01_2057
ECT-R 2:
ECTR2_1808
ED133:
SAOV_2038
ED98:
SAAV_2004
HO 5096 0412:
SAEMRSA15_18520
JH1:
SaurJH1_2027
JH9:
SaurJH9_1994
JKD6008:
SAA6008_01960
JKD6159:
SAA6159_01867
LGA251:
SARLGA251_18200
M013:
M013TW_1973
MRSA252:
SAR2028
MSHR1132:
SAMSHR1132_17810
MSSA476:
SAS1860
Mu3:
SAHV_1921
Mu50:
SAV1936
MW2:
MW1878
RF122:
SAB1872
ST398:
SAPIG2057
T0131:
SAT0131_02066
TCH60:
HMPREF0772_11205
TW20:
SATW20_19300
USA300_TCH1516:
USA300HOU_1940
VC40:
SAVC_08945
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNPLAQSLNEQLQQSNATAFTMLSDLGQNMFYPKGILSQSAEAKSTTYNATIGMATNKDG
N315 MNPLAQSLNEQLQQSNATAFTMLSDLGQNMFYPKGILSQSAEAKSTTYNATIGMATNKDG
NCTC8325 MNPLAQSLNEQLQQSNATAFTMLSDLGQNMFYPKGILSQSAEAKSTTYNATIGMATNKDG
Newman MNPLAQSLNEQLQQSNATAFTMLSDLGQNMFYPKGILSQSAEAKSTTYNATIGMATNKDG
USA300_FPR3757 MNPLAQSLNEQLQQSNATAFTMLSDLGQNMFYPKGILSQSAEAKSTTYNATIGMATNKDG
************************************************************
COL KMFASSLDAMFNDLTPDEIFPYVPPQGIEELRDLWQQKMLRDNPELSIDNMSLPIVTNAL
N315 KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSLPIVTNAL
NCTC8325 KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSLPIVTNAL
Newman KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSLPIVTNAL
USA300_FPR3757 KMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSLPIVTNAL
**********************.*************************************
COL THGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEA
N315 THGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEA
NCTC8325 THGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEA
Newman THGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEA
USA300_FPR3757 THGLSLVGDLFVNQGDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKDGHYTTDSLVEA
************************************************************
COL LQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKALADKGTKVIAVVDDAYYGLFYE
N315 LQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKALADKGTKVIAVVDDAYYGLFYE
NCTC8325 LQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKALADKGTKVIAVVDDAYYGLFYE
Newman LQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKALADKGTKVIAVVDDAYYGLFYE
USA300_FPR3757 LQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVDAIKALADKGTKVIAVVDDAYYGLFYE
************************************************************
COL DVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG
N315 DVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG
NCTC8325 DVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG
Newman DVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG
USA300_FPR3757 DVYTQSLFTALSNLNSNAILPVRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKG
************************************************************
COL LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA
N315 LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA
NCTC8325 LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA
Newman LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA
USA300_FPR3757 LIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQA
************************************************************
COL YDFNSGYFMAIKVHDVDPEELRKHLIEKYSIGVIALNATDIRIAFSCVEKEDIPHVFDSI
N315 YDFNSGYFMAIKVHDVDPEELRKHLIEKYSIGVIALNATDIRIAFSCVEKEDIPHVFDSI
NCTC8325 YDFNSGYFMAIKVHDVDPEELRKHLIEKYSIGVIALNATDIRIAFSCVEKEDIPHVFDSI
Newman YDFNSGYFMAIKVHDVDPEELRKHLIEKYSIGVIALNATDIRIAFSCVEKEDIPHVFDSI
USA300_FPR3757 YDFNSGYFMAIKVHDVDPEELRKHLIEKYSIGVIALNATDIRIAFSCVEKEDIPHVFDSI
************************************************************
COL AKAIDDLR
N315 AKAIDDLR
NCTC8325 AKAIDDLR
Newman AKAIDDLR
USA300_FPR3757 AKAIDDLR
********