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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004995000
- symbol?: —
- synonym:
- description?: thioredoxin family protein
- thioredoxin family protein
- Thioredoxin
- thioredoxin-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5177534..5178127
- synteny block?: BlockID0038760
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1887
08BA02176:
C248_2016
11819-97:
MS7_1964
6850:
RSAU_001824
71193:
ST398NM01_2050
ECT-R 2:
ECTR2_1801
ED133:
SAOV_2031
ED98:
SAAV_1996
HO 5096 0412:
SAEMRSA15_18450
JH1:
SaurJH1_2019
JH9:
SaurJH9_1986
JKD6008:
SAA6008_01967
JKD6159:
SAA6159_01860
LGA251:
SARLGA251_18130
M013:
M013TW_1966
MRSA252:
SAR2021
MSHR1132:
SAMSHR1132_17730
MSSA476:
SAS1853
Mu3:
SAHV_1914
Mu50:
SAV1929
MW2:
MW1870
RF122:
SAB1865
ST398:
SAPIG2050
T0131:
SAT0131_02059 (poxB)
TCH60:
HMPREF0772_11212
TW20:
SATW20_19230
USA300_TCH1516:
USA300HOU_1932
VC40:
SAVC_08905
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRIKKIKEMNYSKVLVITE
N315 MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRIKKIKEMNYSKVLVITE
NCTC8325 MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRIKKIKEMNYSKVLVITE
USA300_FPR3757 MTNLETYFKNSQPLNEYIDGMKTNQDTVLSIYQSFELPEDDSRIKKIKEMNYSKVLVITE
************************************************************
COL DWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTNGKSRAIPIFVFLNDQFEQ
N315 DWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTNGKSRAIPIFVFLNDQFEQ
NCTC8325 DWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTNGKSRAIPIFVFLNDQFEQ
USA300_FPR3757 DWCGDAMMNLPILKHISEALNLEVRVFHRDDDTKLIDQYLTNGKSRAIPIFVFLNDQFEQ
************************************************************
COL ETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHLVISNRYKTDASFWKAVYNSI
N315 ETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHLVISNRYKTDASFWKAVYNSI
NCTC8325 ETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHLVISNRYKTDASFWKAVYNSI
USA300_FPR3757 ETVWGPRANEVQKFVTDVRADKLPSKDHPDYADLEKETHLVISNRYKTDASFWKAVYNSI
************************************************************
COL LNKLENK
N315 LNKLENK
NCTC8325 LNKLENK
USA300_FPR3757 LNKLENK
*******