Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004953000
- symbol?: pncA
- synonym:
- description?: cysteine hydrolase
- cysteine hydrolase
- cysteine hydrolase, putative
- isochorismatase
- isochorismatase family protein
- pyrazinamidase/nicotinamidase
- isochorismatase hydrolase
- bifunctional pyrazinamidase/nicotinamidase
- isochorismatase transposase
- Nicotinamidase
- Pyrazinamidase
- pyrazinamidase/nicotinamidase-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5141729..5142289
- synteny block?: BlockID0038570
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1875
08BA02176:
C248_1995
11819-97:
MS7_1953
6850:
RSAU_001805
71193:
ST398NM01_2013
ECT-R 2:
ECTR2_1790
ED133:
SAOV_2021
ED98:
SAAV_1985
HO 5096 0412:
SAEMRSA15_18280
JH1:
SaurJH1_2008
JH9:
SaurJH9_1974
JKD6008:
SAA6008_01939
JKD6159:
SAA6159_01850
LGA251:
SARLGA251_18030
M013:
M013TW_1955
MRSA252:
SAR2011
MSHR1132:
SAMSHR1132_17630
MSSA476:
SAS1842
Mu3:
SAHV_1903
Mu50:
SAV1918
MW2:
MW1859
RF122:
SAB1855
ST398:
SAPIG2013
T0131:
SAT0131_02047
TCH60:
HMPREF0772_11223 (entB3)
TW20:
SATW20_19130
USA300_TCH1516:
USA300HOU_1920
VC40:
SAVC_08855
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNYYQDHIFFLMDLHYLHD
N315 MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNYYQDHIFFLMDLHYLHD
NCTC8325 MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNYYQDHIFFLMDLHYLHD
Newman MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNYYQDHIFFLMDLHYLHD
USA300_FPR3757 MTHRALLVVDYSYDFIADDGLLTCGKPGQNIEDFIVSRINDFNYYQDHIFFLMDLHYLHD
************************************************************
COL IHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFIDKTRYDSFFGTPLDSLLR
N315 IHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFIDKTRYDSFFGTPLDSLLR
NCTC8325 IHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFIDKTRYDSFFGTPLDSLLR
Newman IHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFIDKTRYDSFFGTPLDSLLR
USA300_FPR3757 IHHPESKLFPPHNIVDTSGRELYGKVGKLYETIKAQPNVHFIDKTRYDSFFGTPLDSLLR
************************************************************
COL ERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVASFNQKGHEWALAHFKNSLGA
N315 ERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVASFNQKGHEWALAHFKNSLGA
NCTC8325 ERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVASFNQKGHEWALAHFKNSLGA
Newman ERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVASFNQKGHEWALAHFKNSLGA
USA300_FPR3757 ERSINQVEIVGVCTDICVLHTAISAYNLGYKISVPAEGVASFNQKGHEWALAHFKNSLGA
************************************************************
COL EVEQHV
N315 EVEQHV
NCTC8325 EVEQHV
Newman EVEQHV
USA300_FPR3757 EVEQHV
******