⊟Summary[edit | edit source]

pan ID^?: SAUPAN004926000
symbol^?: gatB
synonym:
description^?: aspartyl/glutamyl-tRNA amidotransferase subunit B
- aspartyl/glutamyl-tRNA amidotransferase subunit B
- aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
- Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
- glutamyl-tRNA(Gln) amidotransferase, B subunit
- Glutamyl-tRNA(Gln) amidotransferase subunit B
- aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B)
- Aspartyl-tRNA(Asn) amidotransferase subunit B
- glu-tRNAGln amidotransferase subunit B
strand^?: -
coordinates^?: 5113622..5114989
synteny block^?: BlockID0038320
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1960 (gatB)

N315:

SA1715 (gatB)

NCTC8325:

SAOUHSC_02116 (gatB)

Newman:

NWMN_1837 (gatB)

USA300_FPR3757:

SAUSA300_1880 (gatB)

04-02981:

SA2981_1856

08BA02176:

C248_1974 (gatB)

11819-97:

MS7_1934 (gatB)

6850:

RSAU_001786 (gatB)

71193:

ST398NM01_1993

ECT-R 2:

ECTR2_1771 (gatB)

ED133:

SAOV_1999

ED98:

SAAV_1965 (gatB)

HO 5096 0412:

SAEMRSA15_18060 (gatB)

JH1:

SaurJH1_1988 (gatB)

JH9:

SaurJH9_1954 (gatB)

JKD6008:

SAA6008_01920 (gatB)

JKD6159:

SAA6159_01830 (gatB)

LGA251:

SARLGA251_17820 (gatB)

M013:

M013TW_1936

MRSA252:

SAR1991 (gatB)

MSHR1132:

SAMSHR1132_17440

MSSA476:

SAS1822 (gatB)

Mu3:

SAHV_1884 (gatB)

Mu50:

SAV1899 (gatB)

MW2:

MW1840 (gatB)

RF122:

SAB1832c (gatB)

ST398:

SAPIG1993

T0131:

SAT0131_02025 (pgm)

TCH60:

HMPREF0772_11243 (gatB2)

TW20:

SATW20_18940 (gatB)

USA300_TCH1516:

USA300HOU_1900 (gatB)

VC40:

SAVC_08755 (gatB)

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAM
N315            MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAM
NCTC8325        MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAM
Newman          MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAM
USA300_FPR3757  MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAM
                ************************************************************

COL             RAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITR
N315            RAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITR
NCTC8325        RAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITR
Newman          RAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITR
USA300_FPR3757  RAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITR
                ************************************************************

COL             LHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVS
N315            LHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVS
NCTC8325        LHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVS
Newman          LHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVS
USA300_FPR3757  LHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVS
                ************************************************************

COL             DVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGE
N315            DVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGE
NCTC8325        DVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGE
Newman          DVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGE
USA300_FPR3757  DVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGE
                ************************************************************

COL             IGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERK
N315            IGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERK
NCTC8325        IGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERK
Newman          IGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERK
USA300_FPR3757  IGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERK
                ************************************************************

COL             AKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELL
N315            AKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELL
NCTC8325        AKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELL
Newman          AKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELL
USA300_FPR3757  AKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELL
                ************************************************************

COL             DTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLK
N315            DTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLK
NCTC8325        DTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLK
Newman          DTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLK
USA300_FPR3757  DTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLK
                ************************************************************

COL             FVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKR
N315            FVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKR
NCTC8325        FVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKR
Newman          FVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKR
USA300_FPR3757  FVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKR
                *******************************************************

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]