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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004856000
- symbol?: recX
- synonym:
- description?: recombination regulator RecX
- recombination regulator RecX
- regulatory protein RecX
- putative regulatory protein
- recX family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5062251..5062991
- synteny block?: BlockID0037860
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1829 (recX)
08BA02176:
C248_1945
11819-97:
MS7_1908 (recX)
6850:
RSAU_001760 (recX)
71193:
ST398NM01_1966
ECT-R 2:
ECTR2_1744
ED133:
SAOV_1899
ED98:
SAAV_1923 (recX)
HO 5096 0412:
SAEMRSA15_17800
JH1:
SaurJH1_1961 (recX)
JH9:
SaurJH9_1927 (recX)
JKD6008:
SAA6008_01830 (recX)
JKD6159:
SAA6159_01804 (recX)
LGA251:
SARLGA251_17550
M013:
M013TW_1909
MRSA252:
SAR1963 (recX)
MSHR1132:
SAMSHR1132_17180
MSSA476:
SAS1795 (recX)
Mu3:
SAHV_1858 (recX)
Mu50:
SAV1873 (recX)
MW2:
MW1813 (recX)
RF122:
SAB1805c (recX)
ST398:
SAPIG1966
T0131:
SAT0131_01996
TCH60:
HMPREF0772_11271 (recX)
TW20:
SATW20_18670
USA300_TCH1516:
USA300HOU_1868 (recX)
VC40:
SAVC_08620 (recX)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYR
N315 MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYR
NCTC8325 MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYR
Newman MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYR
USA300_FPR3757 MPKITKIEVQKKNKERFNLFLDEQFEMGIDIDTLVKFNLKKGQQLEAADMAEIQKYDHYR
************************************************************
COL IGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTM
N315 IGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTM
NCTC8325 IGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTM
Newman IGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTM
USA300_FPR3757 IGLNKAIQYLSYKKRTEKEVIQYLQKEEISEQAISEVIEYCYREKLIDHQDYAESLKNTM
************************************************************
COL IRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDDIIQIAEKISKTKKGPQNKVK
N315 IRTTDKGPKIYQQKLYQLGIEPNIIEMFTELYREQQELDDIIQIAEKISKTKKGPQNKVK
NCTC8325 IRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDDIIQIAEKISKTKKGPQNKVK
Newman IRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDDIIQIAEKISKTKKGPQNKVK
USA300_FPR3757 IRTTDKGPKIYQQKLYQLGIEPNIIEIFTELYREQQELDDIIQIAEKISKTKKGPQNKVK
**************************:*********************************
COL EKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
N315 EKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
NCTC8325 EKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
Newman EKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
USA300_FPR3757 EKVMQSLIQKGFEMETIHAVLNEMDFTQDEAVLDDLLQRDLEKIYNKNRKKYTQQKLISK
************************************************************
COL TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE
N315 TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE
NCTC8325 TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE
Newman TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE
USA300_FPR3757 TIEGLMRKGYKYDKIKAKLEESGIADGTEEIE
********************************