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PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN004561000
  • symbol?: splE
  • synonym:
  • description?: serine protease SplE

      descriptions from strain specific annotations:

    • serine protease SplE
    • serine protease SplD
    • serine protease SplB
  • strand?: -
  • coordinates?: 4793048..4793764
  • synteny block?: BlockID0035500
  • occurrence?: in 32% of 34 strains

splE : staphylococcal serine protease SplE [1]

• A crystal structure is available : 5MM8

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    NWMN_1702 (splE)
    USA300_FPR3757:
    04-02981:
    08BA02176:
    11819-97:
    6850:
    71193:
    ECT-R 2:
    ED133:
    ED98:
    HO 5096 0412:
    JH1:
    JH9:
    JKD6008:
    JKD6159:
    JSNZ:
    JSNZ_001805 (splD)
    LGA251:
    SARLGA251_16930 (splE)
    M013:
    MRSA252:
    SAR1902 (splE)
    MSHR1132:
    MSSA476:
    Mu3:
    Mu50:
    MW2:
    RF122:
    ST398:
    T0131:
    TCH60:
    HMPREF0772_11333 (splB4)
    TW20:
    SATW20_18070 (splE)
    USA300_TCH1516:
    USA300HOU_1802 (splE)
    VC40:
    SAVC_08285

Genome Viewer[edit | edit source]

COL
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MNKNIIIKSIAALTILTSVTGVGTTVVEGIQQTAKAEHNVKLIKNTNVAPYNGVVSIGSG
    NCTC8325        MNKNIIIKSIAALTILTSVTGVGTTVVEGIQQTAKAEHNVKLIKNTNVAPYNGVVSIGSG
    Newman          MNKNIIIKSIAALTILTSVTGVGTTVVEGIQQTAKAEHNVKLIKNTNVAPYNGVVSIGSG
    USA300_FPR3757  MNKNIIIKSIAALTILTSVTGVGTTVVEGIQQTAKAEHNVKLIKNTNVAPYNGVVSIGSG
                    ************************************************************

    COL             TGFIVGKNTIVTNKHVVAGMEIGAHIIAHPNGEYNNGGFYKVKKIVRYSGQEDIAILHVE
    NCTC8325        TGFIVGKNTIVTNKHVVAGMEIGAHIIAHPNGEYNNGGFYKVKKIVRYSGQEDIAILHVE
    Newman          TGFIVGKNTIVTNKHVVAGMEIGAHIIAHPNGEYNNGGFYKVKKIVRYSGQEDIAILHVE
    USA300_FPR3757  TGFIVGKNTIVTNKHVVAGMEIGAHIIAHPNGEYNNGGFYKVKKIVRYSGQEDIAILHVE
                    ************************************************************

    COL             DKAVHPKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVLSVKGNMI
    NCTC8325        DKAVHPKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVLSVKGNMI
    Newman          DKAVHPKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVLSVKGNMI
    USA300_FPR3757  DKAVHPKNRNFKDYTGILKIASEAKENERISIVGYPEPYINKFQMYESTGKVLSVKGNMI
                    ************************************************************

    COL             ITDAFVEPGNSGSAVFNSKYEVVGVHFGGNGPGNKSTKGYGVYFSPEIKKFIADNTDK
    NCTC8325        ITDAFVEPGNSGSAVFNSKYEVVGVHFGGNGPGNKSTKGYGVYFSPEIKKFIADNTDK
    Newman          ITDAFVEPGNSGSAVFNSKYEVVGVHFGGNGPGNKSTKGYGVYFSPEIKKFIADNTDK
    USA300_FPR3757  ITDAFVEPGNSGSAVFNSKYEVVGVHFGGNGPGNKSTKGYGVYFSPEIKKFIADNTDK
                    **********************************************************

  1. Natalia Stach, Magdalena Kalinska, Michal Zdzalik, Radoslaw Kitel, Abdulkarim Karim, Karol Serwin, Wioletta Rut, Katrine Larsen, Abeer Jabaiah, Magdalena Firlej, Benedykt Wladyka, Patrick Daugherty, Henning Stennicke, Marcin Drag, Jan Potempa, Grzegorz Dubin
    Unique Substrate Specificity of SplE Serine Protease from Staphylococcus aureus.
    Structure: 2018, 26(4);572-579.e4
    [PubMed:29526434] [WorldCat.org] [DOI] (I p)
    Franziska Scherr, Murthy N Darisipudi, Friedemann R Börner, Sophie Austermeier, Franziska Hoffmann, Martin Eberhardt, Goran Abdurrahman, Christopher Saade, Ferdinand von Eggeling, Lydia Kasper, Silva Holtfreter, Barbara M Bröker, Michael Kiehntopf
    Alpha-1-antitrypsin as novel substrate for S. aureus' Spl proteases - implications for virulence.
    Front Immunol: 2024, 15;1481181
    [PubMed:39628483] [WorldCat.org] [DOI] (I e)