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PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary[edit | edit source]

  • pan ID?: SAUPAN004453000
  • symbol?: —
  • synonym:
  • description?: hypothetical protein
  • strand?: -
  • coordinates?: 4701253..4701369
  • synteny block?: BlockID0034500
  • occurrence?: in 24% of 34 strains

⊟Additional information (user-provided)[edit | edit source]

⊟Orthologs[edit | edit source]

    COL:
    N315:
    —
    NCTC8325:
    Newman:
    —
    USA300_FPR3757:
    —
    JSNZ:
    04-02981:
    —
    08BA02176:
    C248_1811
    11819-97:
    —
    6850:
    —
    71193:
    ST398NM01_1817
    ECT-R 2:
    —
    ED133:
    —
    ED98:
    SAAV_1775
    HO 5096 0412:
    —
    JH1:
    —
    JH9:
    —
    JKD6008:
    SAA6008_01738
    JKD6159:
    —
    LGA251:
    —
    M013:
    —
    MRSA252:
    —
    MSHR1132:
    —
    MSSA476:
    —
    Mu3:
    —
    Mu50:
    —
    MW2:
    —
    RF122:
    —
    ST398:
    SAPIG1817
    T0131:
    —
    TCH60:
    —
    TW20:
    —
    USA300_TCH1516:
    —
    VC40:
    —

⊟Genome Viewer[edit | edit source]

COL
NCTC8325
JSNZ

⊟Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.505)


    COL             MMLISFIYNNMDNNNTINRNLHSEFAIIMLLKINEKGAV
    NCTC8325        MMLISFIYNNMDNNNTINRNLHSEFAIIMLLKINEKGAV
    JSNZ            MMLISFIYNNMDNNNTINRNLHSEFAIIMLLKINEKGAV
                    ***************************************

⊟Literature[edit | edit source]