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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004410000
- symbol?: —
- synonym:
- description?: DUF1444 domain-containing protein
- DUF1444 domain-containing protein
- hypothetical protein with DUF1444
- protein BCE33L4443
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4657412..4658254
- synteny block?: BlockID0034140
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1701
08BA02176:
C248_1788
11819-97:
MS7_1749
6850:
RSAU_001600
71193:
ST398NM01_1796
ECT-R 2:
ECTR2_1583
ED133:
SAOV_1729
ED98:
SAAV_1753
HO 5096 0412:
SAEMRSA15_16510
JH1:
SaurJH1_1833
JH9:
SaurJH9_1798
JKD6008:
SAA6008_01714
JKD6159:
SAA6159_01666
LGA251:
SARLGA251_16330
M013:
M013TW_1757
MRSA252:
SAR1821
MSHR1132:
SAMSHR1132_15930
MSSA476:
SAS1669
Mu3:
SAHV_1729
Mu50:
SAV1743
MW2:
MW1686
RF122:
SAB1603c
ST398:
SAPIG1796
T0131:
SAT0131_01851
TCH60:
HMPREF0772_11410
TW20:
SATW20_17330
USA300_TCH1516:
USA300HOU_1733
VC40:
SAVC_07925
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIV
N315 MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIV
NCTC8325 MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIV
Newman MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIV
USA300_FPR3757 MNTFQMRDKLKERLSHLDVDFKFNREEETLRIYRTDNNKGITIKLNAIVAKYEDKKEKIV
************************************************************
COL DEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYA
N315 DEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYA
NCTC8325 DEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYA
Newman DEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYA
USA300_FPR3757 DEIVYYVDEAIAQMADKTLESISSSQIMPVIRATSFDKKTKQGVPFIYDEHTAETAVYYA
************************************************************
COL VDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYD
N315 VDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYD
NCTC8325 VDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYD
Newman VDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYD
USA300_FPR3757 VDLGKSYRLIDESMLEDLKLTEQQIREMSLFNVRKLSNSYTTDEVKGNIFYFINSNDGYD
************************************************************
COL ASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPI
N315 ASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPI
NCTC8325 ASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPI
Newman ASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPI
USA300_FPR3757 ASRILNTAFLNEIEAQCQGEMLVAVPHQDVLIIADIRNKTGYDVMAHLTMEFFTKGLVPI
************************************************************
COL TSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFDKDK
N315 TSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
NCTC8325 TSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
Newman TSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
USA300_FPR3757 TSLSFGYKQGHLEPIFILGKNNKQKRDPNVIQRLEANRRKFNKDK
*****************************************:***