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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004400000
- symbol?: ccpA
- synonym:
- description?: catabolite control protein A
- catabolite control protein A
- catabolite control protein A, putative
- global transcriptional regulator, catabolite control protein A
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4640540..4641484
- synteny block?: BlockID0034040
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1694 (ccpA)
08BA02176:
C248_1780 (ccpA)
11819-97:
MS7_1742 (ccpA)
6850:
RSAU_001592 (ccpA)
71193:
ST398NM01_1788
ECT-R 2:
ECTR2_1576 (ccpA)
ED133:
SAOV_1722 (ccpA)
ED98:
SAAV_1746 (ccpA)
HO 5096 0412:
SAEMRSA15_16440 (ccpA)
JH1:
SaurJH1_1826
JH9:
SaurJH9_1791
JKD6008:
SAA6008_01706 (ccpA)
JKD6159:
SAA6159_01659 (ccpA)
LGA251:
SARLGA251_16260 (ccpA)
M013:
M013TW_1750
MRSA252:
SAR1814 (ccpA)
MSHR1132:
SAMSHR1132_15860
MSSA476:
SAS1662
Mu3:
SAHV_1722 (ccpA)
Mu50:
SAV1736 (ccpA)
MW2:
MW1679 (ccpA)
RF122:
SAB1596c (ccpA)
ST398:
SAPIG1788 (ccpA)
T0131:
SAT0131_01841
TCH60:
HMPREF0772_11417 (ccpA)
TW20:
SATW20_17260 (ccpA)
USA300_TCH1516:
USA300HOU_1725 (ccpA)
VC40:
SAVC_07890
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
N315 ---------------MATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
NCTC8325 MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
Newman MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
USA300_FPR3757 MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKT
*********************************************
COL TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
N315 TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
NCTC8325 TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
Newman TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
USA300_FPR3757 TTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGI
************************************************************
COL IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
N315 IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
NCTC8325 IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
Newman IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
USA300_FPR3757 IFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNIDFTEAAKEITGELIEKGAKSF
************************************************************
COL ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
N315 ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
NCTC8325 ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
Newman ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
USA300_FPR3757 ALVGGEHSKKAQEDVLEGLTEVLNKNGLQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
************************************************************
COL LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
N315 LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
NCTC8325 LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
Newman LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
USA300_FPR3757 LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMR
************************************************************
COL LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
N315 LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
NCTC8325 LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
Newman LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
USA300_FPR3757 LLTKYMNDEKIEEPNVVLPHRIEYRGTTK
*****************************