PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004365000
• symbol^?: tpx
• synonym:
• description^?: 2-Cys peroxiredoxin

  descriptions from strain specific annotations:

  • 2-Cys peroxiredoxin
  • thiol peroxidase
  • thiol peroxidase, putative
  • lipid hydroperoxide peroxidase
  • putative thiol peroxidase
  • thiol peroxidase (Scavengase P20)
  • Thiol peroxidase, Tpx-type
  • thiol peroxidase Tpx
  • Thioredoxin peroxidase
• strand^?: -
• coordinates^?: 4605217..4605711
• synteny block^?: BlockID0033700
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1762 (tpx)
N315:
SA1535 (tpx)
NCTC8325:
SAOUHSC_01822 (tpx)
Newman:
NWMN_1607 (tpx)
USA300_FPR3757:
SAUSA300_1659 (tpx)
04-02981:
SA2981_1671
08BA02176:
C248_1754
11819-97:
MS7_1719 (tpx)
6850:
RSAU_001570 (tpx)
71193:
ST398NM01_1766
ECT-R 2:
ECTR2_1553
ED133:
SAOV_1700
ED98:
SAAV_1723 (tpx)
HO 5096 0412:
SAEMRSA15_16220
JH1:
SaurJH1_1804 (tpx)
JH9:
SaurJH9_1769 (tpx)
JKD6008:
SAA6008_01681 (tpx)
JKD6159:
SAA6159_01637 (tpx)
LGA251:
SARLGA251_16040
M013:
M013TW_1726
MRSA252:
SAR1791 (tpx)
MSHR1132:
SAMSHR1132_15630
MSSA476:
SAS1640 (tpx)
Mu3:
SAHV_1699 (tpx)
Mu50:
SAV1713 (tpx)
MW2:
MW1656 (tpx)
RF122:
SAB1572c (tpx)
ST398:
SAPIG1766
T0131:
SAT0131_01816
TCH60:
HMPREF0772_11439 (tpx)
TW20:
SATW20_17040
USA300_TCH1516:
USA300HOU_1700 (tpx)
VC40:
SAVC_07775 (tpx)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
  N315            MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
  NCTC8325        MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
  Newman          MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
  USA300_FPR3757  MTEITFKGGPIHLKGQQINEGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVC
                  ************************************************************
  
  COL             DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
  N315            DQQTRKFNSEASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
  NCTC8325        DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
  Newman          DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
  USA300_FPR3757  DQQTRKFNSDASKEEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVM
                  *********:**************************************************
  
  COL             EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
  N315            EELRLLARAVFVLDVDNKVVYKEIVSEGTDFPDFDAALAAYKNI
  NCTC8325        EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
  Newman          EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
  USA300_FPR3757  EELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKNI
                  **************.*****************************