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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004354000
- symbol?: —
- synonym:
- description?: CBS domain-containing protein
- CBS domain-containing protein
- transcriptional regulator containing CBS domains, putative
- CBS domain protein
- Cytosolic protein containing multiple CBS domains
- DRTGG domain-containing protein
- pseudogene
- putative DNA-binding protein
- thioesterase family protein
- thioesterase superfamily protein
- transcriptional regulator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4595754..4597052
- synteny block?: BlockID0033590
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1663
08BA02176:
C248_1746
11819-97:
MS7_1711
6850:
RSAU_001562
71193:
ST398NM01_1758
ECT-R 2:
ECTR2_1545
ED133:
SAOV_1692
ED98:
SAAV_1714
HO 5096 0412:
SAEMRSA15_16140
JH1:
SaurJH1_1795
JH9:
SaurJH9_1761
JKD6008:
SAA6008_01673
JKD6159:
SAA6159_01628
LGA251:
SARLGA251_15960
M013:
M013TW_1717
MRSA252:
SAR1783
MSHR1132:
SAMSHR1132_15550
MSSA476:
SAS1632
Mu3:
SAHV_1691
Mu50:
SAV1705
MW2:
MW1648
RF122:
SAB1563c
ST398:
SAPIG1758
T0131:
SAT0131_01808
TCH60:
HMPREF0772_11447
TW20:
SATW20_16960
USA300_TCH1516:
USA300HOU_1691
VC40:
SAVC_07735
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDADKMGMVATIDRVGTVRI
N315 MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDADKMGMVATIDRVGTVRI
NCTC8325 MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDADKMGMVATIDRVGTVRI
Newman MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDADKMGMVATIDRVGTVRI
USA300_FPR3757 MTKHEQILDYIESLSIGSKISVRKIAKFLNVSEGTAYRAIKDADKMGMVATIDRVGTVRI
************************************************************
COL EKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGAMELKDILKYIGPKTLLIV
N315 EKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGAMELKDILKYIGPKTLLIV
NCTC8325 EKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGAMELKDILKYIGPKTLLIV
Newman EKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGAMELKDILKYIGPKTLLIV
USA300_FPR3757 EKRNRNEIEHLTFNEIVNIIDGQVLGGNKGITKMVSKFAIGAMELKDILKYIGPKTLLIV
************************************************************
COL GNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPVLSSSYDTFLVANIINKALFN
N315 GNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPVLSSSYDTFLVANIINKALFN
NCTC8325 GNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPVLSSSYDTFLVANIINKALFN
Newman GNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPVLSSSYDTFLVANIINKALFN
USA300_FPR3757 GNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPVLSSSYDTFLVANIINKALFN
************************************************************
COL QKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANRTGHTRFPVVNESYKLVGIVTSR
N315 QKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANRTGHTRFPVVNESYKLVGIVTSR
NCTC8325 QKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANRTGHTRFPVVNESYKLVGIVTSR
Newman QKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANRTGHTRFPVVNESYKLVGIVTSR
USA300_FPR3757 QKIRKDILIVQDIMTPLDDLSVLFDTMKIADYKRMANRTGHTRFPVVNESYKLVGIVTSR
************************************************************
COL EMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMIWEGIELIPVVSSNKKTVGVINRQD
N315 EMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMIWEGIELIPVVSSNKKTVGVINRQD
NCTC8325 EMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMIWEGIELIPVVSSNKKTVGVINRQD
Newman EMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMIWEGIELIPVVSSNKKTVGVINRQD
USA300_FPR3757 EMINTKDDDEIDKVMTRNPIYVNAMSTVASCAHMMIWEGIELIPVVSSNKKTVGVINRQD
************************************************************
COL VLKSMQLLGRQPQMGETINDQIAKYITMNQDGITVEVSPLLINHYGTVSKAAFVSIIEET
N315 VLKSMQLLGRQPQMGETINDQIAKYITMNQDGITVEVSPLLINHYGTVSKAAFVSIIEET
NCTC8325 VLKSMQLLGRQPQMGETINDQIAKYITMNQDGITVEVSPLLINHYGTVSKAAFVSIIEET
Newman VLKSMQLLGRQPQMGETINDQIAKYITMNQDGITVEVSPLLINHYGTVSKAAFVSIIEET
USA300_FPR3757 VLKSMQLLGRQPQMGETINDQIAKYITMNQDGITVEVSPLLINHYGTVSKAAFVSIIEET
************************************************************
COL IQYEMRKFKKGNVMIENLNIVYIKTVPIESHITVRFGILDVGRNFAKIEVNMHSQNDKVA
N315 IQYEMRKFKKGNVMIENLNIVYIKTVPIESHITVRFGILDVGRNFAKIEVNMHSQNDKVA
NCTC8325 IQYEMRKFKKGNVMIENLNIVYIKTVPIESHITVRFGILDVGRNFAKIEVNMHSQNDKVA
Newman IQYEMRKFKKGNVMIENLNIVYIKTVPIESHITVRFGILDVGRNFAKIEVNMHSQNDKVA
USA300_FPR3757 IQYEMRKFKKGNVMIENLNIVYIKTVPIESHITVRFGILDVGRNFAKIEVNMHSQNDKVA
************************************************************
COL SALVICQMFDEV
N315 SALVICQMFDEV
NCTC8325 SALVICQMFDEV
Newman SALVICQMFDEV
USA300_FPR3757 SALVICQMFDEV
************