Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004295000
- symbol?: —
- synonym:
- description?: DNA mismatch repair protein MutT
- DNA mismatch repair protein MutT
- MutT/nudix family protein
- MutT-nudix family protein
- NUDIX domain-containing protein
- MutT/Nudix hydrolase family protein
- NUDIX hydrolase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4538661..4539269
- synteny block?: BlockID0033190
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1637
08BA02176:
C248_1719
11819-97:
MS7_1685
6850:
RSAU_001536
71193:
ST398NM01_1732
ECT-R 2:
ECTR2_1518
ED133:
SAOV_1666
ED98:
SAAV_1665
HO 5096 0412:
SAEMRSA15_15880
JH1:
SaurJH1_1769
JH9:
SaurJH9_1735
JKD6008:
SAA6008_01645
JKD6159:
SAA6159_01602
LGA251:
SARLGA251_15700
M013:
M013TW_1691
MRSA252:
SAR1757
MSHR1132:
SAMSHR1132_15050
MSSA476:
SAS1606
Mu3:
SAHV_1664
Mu50:
SAV1677
MW2:
MW1621
RF122:
SAB1537c
ST398:
SAPIG1732
T0131:
SAT0131_01780
TCH60:
HMPREF0772_11473
TW20:
SATW20_16680
USA300_TCH1516:
—
VC40:
SAVC_07595
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK
N315 MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK
NCTC8325 MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK
Newman MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK
USA300_FPR3757 MSKFDEQIIVVPREIIFNNEKNTFNGFLNKNKPEGQNIFDALSQYEVKRRGDMEEDPSYK
************************************************************
COL QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR
N315 QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR
NCTC8325 QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR
Newman QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR
USA300_FPR3757 QLISYCLLENEHGEILVYERLSGGGEARLHGQSSIGVGGHMNDVPGAESINEVLRVNAQR
************************************************************
COL ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV
N315 ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV
NCTC8325 ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV
Newman ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV
USA300_FPR3757 ELEEEVGLSEQDSQNMEYIGFINDDNNEVGKVHIGVVFKITVSTNDVEAKETDTLRIKWV
************************************************************
COL EKGNIESYDDFETWSALILQDL
N315 EKGNIESYDDFETWSALILQDL
NCTC8325 EKGNIESYDDFETWSALILQDL
Newman EKGNIESYDDFETWSALILQDL
USA300_FPR3757 EKGNIESYDDFETWSALILQDL
**********************