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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004293000
- symbol?: —
- synonym:
- description?: hypothetical protein
- strand?: -
- coordinates?: 4537711..4538642
- synteny block?: BlockID0033170
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1636
08BA02176:
C248_1718
11819-97:
MS7_1684
6850:
RSAU_001535
71193:
ST398NM01_1731
ECT-R 2:
ECTR2_1517
ED133:
SAOV_1665
ED98:
SAAV_1664
HO 5096 0412:
SAEMRSA15_15870
JH1:
SaurJH1_1768
JH9:
SaurJH9_1734
JKD6008:
SAA6008_01644
JKD6159:
SAA6159_01601
LGA251:
SARLGA251_15690
M013:
M013TW_1690
MRSA252:
SAR1756
MSHR1132:
SAMSHR1132_15040
MSSA476:
SAS1605
Mu3:
SAHV_1663
Mu50:
SAV1676
MW2:
MW1620
RF122:
SAB1536c
ST398:
SAPIG1731
T0131:
—
TCH60:
HMPREF0772_11474
TW20:
SATW20_16670
USA300_TCH1516:
—
VC40:
SAVC_07590
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSDIIQFPNSSKKLYKDIKRAEQDQNYDLMYEYIVQYERQFELTEEIAMMKCRMLYETGS
N315 MSDIIQFPNSSKKLYKDIKRAEQDQNYDLMYEYIVQYERQFELTEEIAMMKCRMLYETGS
NCTC8325 MSDIIQFPNSSKKLYKDIKRAEQDQNYDLMYEYIVQYERQFELTEEIAMMKCRMLYETGS
Newman MSDIIQFPNSSKKLYKDIKRAEQDQNYDLMYEYIVQYERQFELTEEIAMMKCRMLYETGS
USA300_FPR3757 MSDIIQFPNSSKKLYKDIKRAEQDQNYDLMYEYIVQYERQFELTEEIAMMKCRMLYETGS
************************************************************
COL FLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEVIHQIIDEVKDHKTRMALH
N315 FLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEVIHQIIDEVKDHKTRMALH
NCTC8325 FLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEVIHQIIDEVKDHKTRMALH
Newman FLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEVIHQIIDEVKDHKTRMALH
USA300_FPR3757 FLELREETIVLLKTGIQQYDALMIYYVKSLIGLGQYFEAVEVIHQIIDEVKDHKTRMALH
************************************************************
COL PLKEFAKSKLIEDEKRLTQSLADFDTLSMREQTHLILKLIDNGHFQFQETVLYILKSNTY
N315 PLKEFAKSKLIEDEKRLTQSLTDFDTLSMREQTHLILKLIDNGHFQFQETVLYILKSNTY
NCTC8325 PLKEFAKSKLIEDEKRLTQSLADFDTLSMREQTHLILKLIDNGHFQFQETVLYILKSNTY
Newman PLKEFAKSKLIEDEKRLTQSLADFDTLSMREQTHLILKLIDNGHFQFQETVLYILKSNTY
USA300_FPR3757 PLKEFAKSKLIEDEKRLTQSLADFDTLSMREQTHLILKLIDNGHFQFQETVLYILKSNTY
*********************:**************************************
COL SYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLKGLEHTTLKEKVIPNVMETLNDG
N315 SYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLNGLEHTTLKEKVIPNVMETLNDG
NCTC8325 SYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLKGLEHTTLKEKVIPNVMETLNDG
Newman SYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLKGLEHTTLKEKVIPNVMETLNDG
USA300_FPR3757 SYNLISLMIEYLRFANCTQELTIEKYGMDVTFVPANLKGLEHTTLKEKVIPNVMETLNDG
*************************************:**********************
COL ALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINAYECYFKNMLGLKCELQSIDAFNFI
N315 ALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINAYECYFKNMLGLKCELQSIDAFNFI
NCTC8325 ALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINAYECYFKNMLGLKCELQSIDAFNFI
Newman ALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINAYECYFKNMLGLKCELQSIDAFNFI
USA300_FPR3757 ALHIAEEAHHIMNNHSIMIYPIDIETLFETNKWINAYECYFKNMLGLKCELQSIDAFNFI
************************************************************
COL QQLDLNNNS
N315 QQLDLNNNS
NCTC8325 QQLDLNNNS
Newman QQLDLNNNS
USA300_FPR3757 QQLDLNNNS
*********