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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004253000
- symbol?: rplU
- synonym:
- description?: 50S ribosomal protein L21
- strand?: -
- coordinates?: 4500416..4500724
- synteny block?: BlockID0032810
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1605 (rplU)
08BA02176:
C248_1690 (rplU)
11819-97:
MS7_1662 (rplU)
6850:
RSAU_001508 (rplU)
71193:
ST398NM01_1710
ECT-R 2:
ECTR2_1495 (rplU)
ED133:
SAOV_1644 (rplU)
ED98:
SAAV_1640 (rplU)
HO 5096 0412:
SAEMRSA15_15640 (rplU)
JH1:
SaurJH1_1737 (rplU)
JH9:
SaurJH9_1704 (rplU)
JKD6008:
SAA6008_01616 (rplU)
JKD6159:
SAA6159_01579 (rplU)
LGA251:
SARLGA251_15490 (rplU)
M013:
M013TW_1667
MRSA252:
SAR1727 (rplU)
MSHR1132:
SAMSHR1132_14830
MSSA476:
SAS1583 (rplU)
Mu3:
SAHV_1634 (rplU)
Mu50:
SAV1647 (rplU)
MW2:
MW1597 (rplU)
RF122:
SAB1516c (rplU)
ST398:
SAPIG1710 (rplU)
T0131:
SAT0131_01748
TCH60:
HMPREF0772_11495 (rplU)
TW20:
SATW20_16410 (rplU)
USA300_TCH1516:
USA300HOU_1646 (rplU)
VC40:
SAVC_07480 (rplU)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTA
N315 MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTA
NCTC8325 MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTA
Newman MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTA
USA300_FPR3757 MFAIIETGGKQIKVEEGQEIFVEKLDVNEGDTFTFDKVLFVGGDSVKVGAPTVEGATVTA
************************************************************
COL TVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
N315 TVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
NCTC8325 TVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
Newman TVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
USA300_FPR3757 TVNKQGRGKKITVFTYKRRKNSKRKKGHRQPYTKLTIDKINA
******************************************