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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004223000
- symbol?: iscS
- synonym:
- description?: cysteine desulfurase
- cysteine desulfurase
- aminotransferase, class V
- class V aminotransferase
- cysteine desulfurase, putative
- aminotransferase class-V family protein
- cysteine desulfurase, NifS
- iron-sulfur cofactor synthesis protein
- putative cysteine desulfurase
- Selenocysteine lyase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4472984..4474126
- synteny block?: BlockID0032510
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1580
08BA02176:
C248_1664
11819-97:
MS7_1638
6850:
RSAU_001484
71193:
ST398NM01_1686
ECT-R 2:
ECTR2_1471
ED133:
SAOV_1620
ED98:
SAAV_1615
HO 5096 0412:
SAEMRSA15_15400
JH1:
SaurJH1_1713
JH9:
SaurJH9_1680
JKD6008:
SAA6008_01592 (nifS)
JKD6159:
SAA6159_01555 (nifS)
LGA251:
SARLGA251_15250
M013:
M013TW_1643
MRSA252:
SAR1702
MSHR1132:
SAMSHR1132_14590
MSSA476:
SAS1558
Mu3:
SAHV_1609
Mu50:
SAV1622
MW2:
MW1572
RF122:
SAB1493c
ST398:
SAPIG1686
T0131:
SAT0131_01719
TCH60:
HMPREF0772_11519 (iscS2)
TW20:
SATW20_16170
USA300_TCH1516:
USA300HOU_1622 (csd1)
VC40:
SAVC_07360
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD
N315 MEIYADYAATTPVKPEVVDAMMMIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD
NCTC8325 MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD
Newman MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD
USA300_FPR3757 MEIYADYAATTPVKPEVVDAMMTIYNSHYGNPSSIHAKGRDARKYLDESRRQIAQLLGAD
********************** *************************************
COL THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD
N315 THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD
NCTC8325 THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD
Newman THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD
USA300_FPR3757 THEIIFTSGATESNNTAIKGIVKANEQLGNHIITSKIEHHSVLHVFEQLEREGFDVTYLD
************************************************************
COL VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI
N315 VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI
NCTC8325 VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI
Newman VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI
USA300_FPR3757 VDDTGAIDLDQLEETITDKTILVSIMFVNNEVGTVQQIYDIQDIIAETNAYFHVDAVQAI
************************************************************
COL GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA
N315 GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA
NCTC8325 GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA
Newman GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA
USA300_FPR3757 GHLDVKFDEFEIDAMSITAHKFGGPKGVGALLVKDHVTLDYPQLGGEQELKRRAGTENLA
************************************************************
COL QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP
N315 QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP
NCTC8325 QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP
Newman QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP
USA300_FPR3757 QIVGMAKALQLAEKNRDDNNIHLMNLKEQFLVKLQERAIPFELNGSMTDATGHIVNLYFP
************************************************************
COL FVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN
N315 FVEVEMMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN
NCTC8325 FVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN
Newman FVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN
USA300_FPR3757 FVEVETMLTLLDMAQIYVSSGSACTAGSTQPSHVLDAMFEDEERSNHSIRFSFNELTTEN
***** ******************************************************
COL EINAIVAEIHKIYFKFKEES
N315 EINAIVAEIHKIYFKFKEES
NCTC8325 EINAIVAEIHKIYFKFKEES
Newman EINAIVAEIHKIYFKFKEES
USA300_FPR3757 EINAIVAEIHKIYFKFKEES
********************