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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004178000
- symbol?: rsfS
- synonym:
- description?: ribosome silencing factor RsfS
- ribosome silencing factor RsfS
- iojap-related protein
- ribosome silencing factor
- iojap family protein
- iojap-like ribosome-associated family protein
- Iojap protein
- Iojap protein family
- putative iojap homolog
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4442071..4442424
- synteny block?: BlockID0032080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1550
08BA02176:
C248_1634
11819-97:
MS7_1609
6850:
RSAU_001456
71193:
ST398NM01_1657
ECT-R 2:
ECTR2_1441
ED133:
SAOV_1591
ED98:
SAAV_1583
HO 5096 0412:
SAEMRSA15_15110
JH1:
SaurJH1_1684
JH9:
SaurJH9_1649
JKD6008:
SAA6008_01562
JKD6159:
SAA6159_01527
LGA251:
SARLGA251_14970
M013:
M013TW_1606
MRSA252:
SAR1669
MSHR1132:
SAMSHR1132_14310
MSSA476:
SAS1529
Mu3:
SAHV_1579
Mu50:
SAV1592
MW2:
MW1543
RF122:
SAB1464c
ST398:
SAPIG1657
T0131:
SAT0131_01687 (gltX)
TCH60:
HMPREF0772_11549
TW20:
SATW20_15880
USA300_TCH1516:
USA300HOU_1593
VC40:
SAVC_07215
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVAN
N315 MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVAN
NCTC8325 MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVAN
Newman MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVAN
USA300_FPR3757 MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVAN
************************************************************
COL EQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYSQVAY
N315 EQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYGQVAY
NCTC8325 EQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYSQVAY
Newman EQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYSQVAY
USA300_FPR3757 EQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYSQVAY
****************************************************.****